Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 TERC-201ENST00000602385 541 ntBASIC19.94■□□□□ 0.78
COL20A1Q9P218 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL20A1Q9P218 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL20A1Q9P218 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.94■□□□□ 0.78
COL20A1Q9P218 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC136632.2-201ENST00000512891 861 ntBASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC027601.4-201ENST00000611259 610 ntBASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC006538.3-201ENST00000612495 578 ntBASIC19.93■□□□□ 0.78
COL20A1Q9P218 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.93■□□□□ 0.78
COL20A1Q9P218 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL20A1Q9P218 NEFHP1-201ENST00000412845 2629 ntBASIC19.92■□□□□ 0.78
COL20A1Q9P218 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 AL139424.1-201ENST00000607572 797 ntBASIC19.92■□□□□ 0.78
COL20A1Q9P218 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 PMS2P7-201ENST00000506558 1336 ntBASIC19.92■□□□□ 0.78
COL20A1Q9P218 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL20A1Q9P218 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.92■□□□□ 0.78
COL20A1Q9P218 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 MED15P5-201ENST00000423150 992 ntBASIC19.91■□□□□ 0.78
COL20A1Q9P218 AC007967.2-201ENST00000432613 625 ntBASIC19.91■□□□□ 0.78
COL20A1Q9P218 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.91■□□□□ 0.78
COL20A1Q9P218 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL20A1Q9P218 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms