Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC009336.1-201ENST00000608941 1553 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC055876.3-201ENST00000431496 288 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC112191.1-201ENST00000523689 701 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC005225.4-201ENST00000557330 545 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC087641.1-201ENST00000557561 1021 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC138649.4-201ENST00000612222 287 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 AC126763.1-201ENST00000552015 2118 ntBASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CXXC1Q9P0U4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 AC007274.1-201ENST00000439805 662 ntBASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 DDX43P3-201ENST00000441064 443 ntBASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 UGT1A2P-201ENST00000454886 866 ntBASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
CXXC1Q9P0U4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 KRT8P48-201ENST00000515599 1220 ntBASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 ACTL9-202ENST00000612068 1252 ntBASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CXXC1Q9P0U4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.83■□□□□ 0.61
CXXC1Q9P0U4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXXC1Q9P0U4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CXXC1Q9P0U4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CXXC1Q9P0U4 AC073130.3-201ENST00000624389 2278 ntBASIC18.83■□□□□ 0.61
CXXC1Q9P0U4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 HLA-V-201ENST00000429037 534 ntBASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 TSPY16P-201ENST00000449843 468 ntBASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 AL513480.1-201ENST00000451731 511 ntBASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 TERF1P3-201ENST00000505638 1227 ntBASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 AC051619.7-201ENST00000568314 623 ntBASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 AC026120.1-201ENST00000611536 926 ntBASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms