Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AL353807.1-201ENST00000427475 662 ntBASIC17.17■□□□□ 0.34
NDE1Q9NXR1 RPS2P4-201ENST00000476944 856 ntBASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AC103702.1-201ENST00000548801 2630 ntBASIC17.17■□□□□ 0.34
NDE1Q9NXR1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 AL023875.1-201ENST00000640777 796 ntBASIC17.17■□□□□ 0.34
NDE1Q9NXR1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NDE1Q9NXR1 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 AL024508.2-201ENST00000607749 1894 ntBASIC17.16■□□□□ 0.34
NDE1Q9NXR1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 AC069152.1-201ENST00000438030 544 ntBASIC17.16■□□□□ 0.34
NDE1Q9NXR1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 AC098934.4-201ENST00000564127 592 ntBASIC17.16■□□□□ 0.34
NDE1Q9NXR1 AC008403.3-201ENST00000598924 454 ntBASIC17.16■□□□□ 0.34
NDE1Q9NXR1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 AL603756.1-201ENST00000606511 2163 ntBASIC17.16■□□□□ 0.34
NDE1Q9NXR1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NDE1Q9NXR1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.15■□□□□ 0.34
NDE1Q9NXR1 AC100803.2-201ENST00000562459 1963 ntBASIC17.15■□□□□ 0.34
NDE1Q9NXR1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 AC008040.2-201ENST00000461049 708 ntBASIC17.15■□□□□ 0.34
NDE1Q9NXR1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NDE1Q9NXR1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms