Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 KRT8P10-201ENST00000450021 1447 ntBASIC18.64■□□□□ 0.57
CD248Q9HCU0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.64■□□□□ 0.57
CD248Q9HCU0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD248Q9HCU0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 KRT18P31-201ENST00000506277 1292 ntBASIC18.63■□□□□ 0.57
CD248Q9HCU0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 AC233702.3-201ENST00000578656 1387 ntBASIC18.63■□□□□ 0.57
CD248Q9HCU0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 KRT8P50-201ENST00000562022 1438 ntBASIC18.63■□□□□ 0.57
CD248Q9HCU0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 AC011676.5-201ENST00000624864 2660 ntBASIC18.63■□□□□ 0.57
CD248Q9HCU0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD248Q9HCU0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CD248Q9HCU0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 AC009078.2-202ENST00000463353 338 ntBASIC18.62■□□□□ 0.57
CD248Q9HCU0 FOSL1P1-201ENST00000511041 816 ntBASIC18.62■□□□□ 0.57
CD248Q9HCU0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 AL031008.1-201ENST00000619963 541 ntBASIC18.62■□□□□ 0.57
CD248Q9HCU0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 NKILA-202ENST00000614771 2598 ntBASIC18.62■□□□□ 0.57
CD248Q9HCU0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CD248Q9HCU0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD248Q9HCU0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 AL118508.1-201ENST00000613502 2345 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 AL356309.3-201ENST00000624132 1934 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 AL357033.4-201ENST00000617703 1807 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 HEIH-201ENST00000623091 1652 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 KRT89P-201ENST00000620027 1478 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD248Q9HCU0 IGHV3-47-201ENST00000425060 335 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 KRT18P41-201ENST00000518924 1277 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.61■□□□□ 0.57
CD248Q9HCU0 AC024563.2-201ENST00000603282 481 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 AL121772.3-201ENST00000610840 674 ntBASIC18.61■□□□□ 0.57
CD248Q9HCU0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms