Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 AL138966.2-201ENST00000621997 464 ntBASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 AC124067.4-201ENST00000519691 2379 ntBASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
POLR2J3Q9H1A7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 NKILA-202ENST00000614771 2598 ntBASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 AC145285.6-201ENST00000604632 637 ntBASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
POLR2J3Q9H1A7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 AL121761.2-201ENST00000598007 1648 ntBASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 GCSHP2-201ENST00000560971 527 ntBASIC16.37■□□□□ 0.21
POLR2J3Q9H1A7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms