Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.97■□□□□ 0.47
PHACTR1Q9C0D0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 AC112698.1-201ENST00000510299 916 ntBASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.96■□□□□ 0.47
PHACTR1Q9C0D0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
PHACTR1Q9C0D0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 AL139327.4-201ENST00000612362 153 ntBASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PHACTR1Q9C0D0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 AC002558.1-201ENST00000488906 803 ntBASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PHACTR1Q9C0D0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PHACTR1Q9C0D0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms