Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
VGLL1Q99990 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
VGLL1Q99990 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.46□□□□□ -0.26
VGLL1Q99990 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VGLL1Q99990 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.46□□□□□ -0.26
VGLL1Q99990 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
VGLL1Q99990 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VGLL1Q99990 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.45□□□□□ -0.26
VGLL1Q99990 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
VGLL1Q99990 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.45□□□□□ -0.26
VGLL1Q99990 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VGLL1Q99990 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.45□□□□□ -0.26
VGLL1Q99990 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.45□□□□□ -0.26
VGLL1Q99990 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VGLL1Q99990 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.45□□□□□ -0.26
VGLL1Q99990 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VGLL1Q99990 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 LINC00304-203ENST00000565008 1864 ntBASIC13.45□□□□□ -0.26
VGLL1Q99990 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 INGX-201ENST00000359239 846 ntBASIC13.45□□□□□ -0.26
VGLL1Q99990 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.45□□□□□ -0.26
VGLL1Q99990 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.45□□□□□ -0.26
VGLL1Q99990 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.45□□□□□ -0.26
VGLL1Q99990 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VGLL1Q99990 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
VGLL1Q99990 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.45□□□□□ -0.26
VGLL1Q99990 MIR4785-201ENST00000585005 73 ntBASIC13.45□□□□□ -0.26
VGLL1Q99990 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.45□□□□□ -0.26
VGLL1Q99990 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.45□□□□□ -0.26
VGLL1Q99990 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
VGLL1Q99990 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 LINC00167-201ENST00000530583 1419 ntBASIC13.45□□□□□ -0.26
VGLL1Q99990 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.45□□□□□ -0.26
VGLL1Q99990 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VGLL1Q99990 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
VGLL1Q99990 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 AC009947.2-201ENST00000444014 672 ntBASIC13.44□□□□□ -0.26
VGLL1Q99990 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
VGLL1Q99990 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.44□□□□□ -0.26
VGLL1Q99990 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 AP006294.2-201ENST00000641667 209 ntBASIC13.44□□□□□ -0.26
VGLL1Q99990 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.44□□□□□ -0.26
VGLL1Q99990 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VGLL1Q99990 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.44□□□□□ -0.26
VGLL1Q99990 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms