Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 UPF3AP3-201ENST00000420996 769 ntBASIC17.7■□□□□ 0.42
SIPA1Q96FS4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 AC132938.5-201ENST00000624980 1813 ntBASIC17.7■□□□□ 0.42
SIPA1Q96FS4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIPA1Q96FS4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 KLF4P1-201ENST00000412782 1185 ntBASIC17.69■□□□□ 0.42
SIPA1Q96FS4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 AC108751.1-201ENST00000490852 363 ntBASIC17.69■□□□□ 0.42
SIPA1Q96FS4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 AL139424.1-201ENST00000607572 797 ntBASIC17.69■□□□□ 0.42
SIPA1Q96FS4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.69■□□□□ 0.42
SIPA1Q96FS4 AC135776.1-201ENST00000319817 2481 ntBASIC17.69■□□□□ 0.42
SIPA1Q96FS4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AC003669.1-201ENST00000334569 611 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 DNAJB3-201ENST00000446806 729 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 SIGLEC30P-201ENST00000455569 941 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 MIR3687-2-201ENST00000577708 61 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AC010327.4-202ENST00000591484 748 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 MIR3687-1-201ENST00000614492 61 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AL691403.2-201ENST00000618460 490 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 AC004706.3-202ENST00000621574 984 ntBASIC17.68■□□□□ 0.42
SIPA1Q96FS4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SIPA1Q96FS4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms