Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AC026471.1-201ENST00000564629 3026 ntBASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AC111152.3-201ENST00000569699 673 ntBASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 STK25P1-201ENST00000585406 838 ntBASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTHRC1Q96CG8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 PMPCAP1-201ENST00000508114 1576 ntBASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 FOSL1P1-201ENST00000511041 816 ntBASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 AP000867.4-201ENST00000641616 219 ntBASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTHRC1Q96CG8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 AC132938.5-201ENST00000624980 1813 ntBASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 NUS1P2-201ENST00000417358 873 ntBASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 TSPY19P-201ENST00000418461 509 ntBASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 TSPY18P-201ENST00000441642 509 ntBASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 AC138894.3-201ENST00000603787 634 ntBASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTHRC1Q96CG8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms