Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM43Q96BQ3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 TFAMP1-201ENST00000412727 736 ntBASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 CNN2P2-201ENST00000443536 909 ntBASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 CNN2P3-201ENST00000450201 906 ntBASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 AL136317.3-201ENST00000618497 906 ntBASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 AC005332.7-201ENST00000614046 2005 ntBASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM43Q96BQ3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 MIR943-201ENST00000401286 94 ntBASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 AL355306.1-201ENST00000415580 579 ntBASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM43Q96BQ3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AC100803.2-201ENST00000562459 1963 ntBASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AC002056.1-201ENST00000395613 760 ntBASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 FAM58DP-201ENST00000428076 619 ntBASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AL671277.1-201ENST00000429656 993 ntBASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AC069335.1-201ENST00000489972 472 ntBASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 AC099522.2-201ENST00000607001 744 ntBASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRIM43Q96BQ3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 AL590787.1-201ENST00000568856 1315 ntBASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM43Q96BQ3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms