Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.83■□□□□ 0.6
DDX1Q92499 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DDX1Q92499 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
DDX1Q92499 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DDX1Q92499 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX1Q92499 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX1Q92499 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX1Q92499 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX1Q92499 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DDX1Q92499 AC007967.3-201ENST00000434308 558 ntBASIC18.82■□□□□ 0.6
DDX1Q92499 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.82■□□□□ 0.6
DDX1Q92499 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX1Q92499 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.82■□□□□ 0.6
DDX1Q92499 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.82■□□□□ 0.6
DDX1Q92499 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DDX1Q92499 IGHV3-41-201ENST00000613121 348 ntBASIC18.82■□□□□ 0.6
DDX1Q92499 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.82■□□□□ 0.6
DDX1Q92499 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
DDX1Q92499 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.82■□□□□ 0.6
DDX1Q92499 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
DDX1Q92499 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 LTB4R2-202ENST00000528054 3092 ntBASIC18.82■□□□□ 0.6
DDX1Q92499 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DDX1Q92499 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.81■□□□□ 0.6
DDX1Q92499 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.81■□□□□ 0.6
DDX1Q92499 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX1Q92499 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX1Q92499 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 AL121772.3-201ENST00000610840 674 ntBASIC18.81■□□□□ 0.6
DDX1Q92499 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.81■□□□□ 0.6
DDX1Q92499 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
DDX1Q92499 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX1Q92499 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX1Q92499 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.81■□□□□ 0.6
DDX1Q92499 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DDX1Q92499 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DDX1Q92499 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
DDX1Q92499 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX1Q92499 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DDX1Q92499 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 KRT18P13-201ENST00000400056 1290 ntBASIC18.8■□□□□ 0.6
DDX1Q92499 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX1Q92499 CHCHD2P8-201ENST00000429873 447 ntBASIC18.8■□□□□ 0.6
DDX1Q92499 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX1Q92499 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX1Q92499 AP005901.3-202ENST00000581653 237 ntBASIC18.8■□□□□ 0.6
DDX1Q92499 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.8■□□□□ 0.6
DDX1Q92499 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
DDX1Q92499 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DDX1Q92499 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX1Q92499 LYSMD4-203ENST00000378904 2122 ntBASIC18.8■□□□□ 0.6
DDX1Q92499 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DDX1Q92499 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.8■□□□□ 0.6
DDX1Q92499 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.8■□□□□ 0.6
DDX1Q92499 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
DDX1Q92499 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX1Q92499 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
DDX1Q92499 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.79■□□□□ 0.6
DDX1Q92499 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 AL023806.1-201ENST00000603994 1649 ntBASIC18.79■□□□□ 0.6
DDX1Q92499 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DDX1Q92499 AC020916.1-201ENST00000587762 1774 ntBASIC18.79■□□□□ 0.6
DDX1Q92499 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms