Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 BX276092.5-203ENST00000456199 560 ntBASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 AC091607.1-201ENST00000490318 1060 ntBASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 AL121672.3-201ENST00000608644 468 ntBASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 CROCCP2-202ENST00000412962 2773 ntBASIC18.27■□□□□ 0.51
PCDH19Q8TAB3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH19Q8TAB3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDH19Q8TAB3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 COX5BP2-201ENST00000392354 334 ntBASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 CHCHD2P8-201ENST00000429873 447 ntBASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AC007967.3-201ENST00000434308 558 ntBASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AC011840.4-201ENST00000578471 627 ntBASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AL138831.2-201ENST00000606564 490 ntBASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDH19Q8TAB3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDH19Q8TAB3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 KRT126P-201ENST00000549467 1181 ntBASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDH19Q8TAB3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms