Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLX4Q8IY92 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 GPS2P2-201ENST00000430745 888 ntBASIC21.36■■□□□ 1.01
SLX4Q8IY92 AC002472.2-201ENST00000442739 958 ntBASIC21.36■■□□□ 1.01
SLX4Q8IY92 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 AC069335.1-201ENST00000489972 472 ntBASIC21.36■■□□□ 1.01
SLX4Q8IY92 SLC25A6P2-201ENST00000497974 877 ntBASIC21.36■■□□□ 1.01
SLX4Q8IY92 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.36■■□□□ 1.01
SLX4Q8IY92 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 AC140658.5-201ENST00000438532 169 ntBASIC21.35■■□□□ 1.01
SLX4Q8IY92 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLX4Q8IY92 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SLX4Q8IY92 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.34■■□□□ 1.01
SLX4Q8IY92 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 FAM58DP-201ENST00000428076 619 ntBASIC21.34■■□□□ 1.01
SLX4Q8IY92 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AL135744.1-201ENST00000565098 629 ntBASIC21.34■■□□□ 1.01
SLX4Q8IY92 RN7SL204P-201ENST00000582831 262 ntBASIC21.34■■□□□ 1.01
SLX4Q8IY92 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.34■■□□□ 1.01
SLX4Q8IY92 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.34■■□□□ 1.01
SLX4Q8IY92 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 AC026120.1-201ENST00000611536 926 ntBASIC21.34■■□□□ 1.01
SLX4Q8IY92 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLX4Q8IY92 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.33■■□□□ 1.01
SLX4Q8IY92 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLX4Q8IY92 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms