Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MTDHP5-201ENST00000598980 586 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC073592.5-201ENST00000624854 528 ntBASIC15.04■□□□□ -0
RAI1Q7Z5J4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 AC006504.4-201ENST00000592118 1568 ntBASIC15.03■□□□□ -0
RAI1Q7Z5J4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 SIRPAP1-201ENST00000448467 1770 ntBASIC15.03■□□□□ -0
RAI1Q7Z5J4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.03■□□□□ -0
RAI1Q7Z5J4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.03■□□□□ -0
RAI1Q7Z5J4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.03■□□□□ -0
RAI1Q7Z5J4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 AL355385.1-201ENST00000606123 409 ntBASIC15.02■□□□□ -0
RAI1Q7Z5J4 AC019129.2-201ENST00000609837 1235 ntBASIC15.02■□□□□ -0
RAI1Q7Z5J4 AC010654.1-201ENST00000615722 808 ntBASIC15.02■□□□□ -0
RAI1Q7Z5J4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.02■□□□□ -0
RAI1Q7Z5J4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.02■□□□□ -0
RAI1Q7Z5J4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 RNF165-205ENST00000588679 2904 ntBASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 AC027796.2-201ENST00000575326 344 ntBASIC15.02□□□□□ -0.01
RAI1Q7Z5J4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 AP000997.3-201ENST00000623333 2250 ntBASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 AC132938.5-201ENST00000624980 1813 ntBASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RAI1Q7Z5J4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms