Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AC009949.1-201ENST00000623048 1830 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 NME2P1-201ENST00000426182 414 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 FAM58CP-201ENST00000435741 640 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AC069335.1-201ENST00000489972 472 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 SERBP1P5-201ENST00000510079 1181 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 KRT8P48-201ENST00000515599 1220 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AL512356.2-201ENST00000546955 174 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 GMCL1P1-201ENST00000463439 1581 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 INGX-202ENST00000489074 768 ntBASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD3Q7Z407 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 AL132655.2-201ENST00000596276 594 ntBASIC12.19□□□□□ -0.46
CSMD3Q7Z407 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 TUBB3P1-201ENST00000405796 1332 ntBASIC12.19□□□□□ -0.46
CSMD3Q7Z407 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.19□□□□□ -0.46
CSMD3Q7Z407 S100A2-206ENST00000497140 697 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD3Q7Z407 AC023141.13-201ENST00000604991 943 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms