Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 AC006116.8-202ENST00000587620 1550 ntBASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 AL049757.1-201ENST00000616842 1596 ntBASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC178Q5BJE1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 PMPCAP1-201ENST00000508114 1576 ntBASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 AL121912.1-201ENST00000603683 238 ntBASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 AP001269.4-201ENST00000609611 512 ntBASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 AC019129.2-201ENST00000609837 1235 ntBASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC178Q5BJE1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 SCARNA2-201ENST00000458748 420 ntBASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 AF238378.1-201ENST00000526806 358 ntBASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 MTDHP3-201ENST00000594186 672 ntBASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 AC008608.2-201ENST00000606089 416 ntBASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC178Q5BJE1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 SIRPAP1-201ENST00000448467 1770 ntBASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 AC109462.3-201ENST00000573934 613 ntBASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 HTR7P1-202ENST00000624664 4411 ntBASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC178Q5BJE1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 AC008764.6-201ENST00000595909 2069 ntBASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC178Q5BJE1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms