Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LONRF3Q496Y0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 MIR662-201ENST00000384847 95 ntBASIC20.13■□□□□ 0.81
LONRF3Q496Y0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 PCDHA12-202ENST00000613593 2588 ntBASIC20.13■□□□□ 0.81
LONRF3Q496Y0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LONRF3Q496Y0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 KRT18P65-201ENST00000439811 1286 ntBASIC20.12■□□□□ 0.81
LONRF3Q496Y0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 MIR3652-201ENST00000579335 131 ntBASIC20.12■□□□□ 0.81
LONRF3Q496Y0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 Z83836.1-201ENST00000624605 1642 ntBASIC20.12■□□□□ 0.81
LONRF3Q496Y0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LONRF3Q496Y0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 KRT18P1-202ENST00000452408 1331 ntBASIC20.11■□□□□ 0.81
LONRF3Q496Y0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 KRT8P26-201ENST00000534154 1276 ntBASIC20.11■□□□□ 0.81
LONRF3Q496Y0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 AC004263.2-201ENST00000617183 678 ntBASIC20.11■□□□□ 0.81
LONRF3Q496Y0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 AL138688.1-201ENST00000624851 1594 ntBASIC20.11■□□□□ 0.81
LONRF3Q496Y0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.11■□□□□ 0.81
LONRF3Q496Y0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms