Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 AL596325.1-201ENST00000563991 1082 ntBASIC30.79■■■□□ 2.52
HMGXB3Q12766 AL359881.2-201ENST00000602973 570 ntBASIC30.79■■■□□ 2.52
HMGXB3Q12766 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
HMGXB3Q12766 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC30.79■■■□□ 2.52
HMGXB3Q12766 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 IGHV3-42-201ENST00000520410 361 ntBASIC30.78■■■□□ 2.52
HMGXB3Q12766 LINC01225-203ENST00000563550 1244 ntBASIC30.78■■■□□ 2.52
HMGXB3Q12766 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 ENSA-206ENST00000361631 725 ntTSL 2 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
HMGXB3Q12766 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
HMGXB3Q12766 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC30.77■■■□□ 2.52
HMGXB3Q12766 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC30.77■■■□□ 2.52
HMGXB3Q12766 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC30.77■■■□□ 2.52
HMGXB3Q12766 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
HMGXB3Q12766 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
HMGXB3Q12766 AC009949.1-201ENST00000623048 1830 ntBASIC30.77■■■□□ 2.52
HMGXB3Q12766 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
HMGXB3Q12766 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
HMGXB3Q12766 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
HMGXB3Q12766 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
HMGXB3Q12766 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
HMGXB3Q12766 AL008721.1-201ENST00000609964 604 ntBASIC30.77■■■□□ 2.52
HMGXB3Q12766 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
HMGXB3Q12766 EFTUD1P1-204ENST00000560401 1798 ntBASIC30.77■■■□□ 2.52
HMGXB3Q12766 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC30.76■■■□□ 2.52
HMGXB3Q12766 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
HMGXB3Q12766 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
HMGXB3Q12766 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HMGXB3Q12766 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
HMGXB3Q12766 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
HMGXB3Q12766 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 KRT8P23-201ENST00000560090 1207 ntBASIC30.76■■■□□ 2.51
HMGXB3Q12766 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 MIR6080-201ENST00000617359 66 ntBASIC30.76■■■□□ 2.51
HMGXB3Q12766 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
HMGXB3Q12766 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
HMGXB3Q12766 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC30.75■■■□□ 2.51
HMGXB3Q12766 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
HMGXB3Q12766 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC30.75■■■□□ 2.51
HMGXB3Q12766 AC022494.1-201ENST00000466044 728 ntBASIC30.75■■■□□ 2.51
HMGXB3Q12766 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
HMGXB3Q12766 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
HMGXB3Q12766 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC30.75■■■□□ 2.51
HMGXB3Q12766 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HMGXB3Q12766 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
HMGXB3Q12766 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 TSSK5P-201ENST00000423978 907 ntBASIC30.74■■■□□ 2.51
HMGXB3Q12766 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 AC097493.3-201ENST00000509725 367 ntBASIC30.74■■■□□ 2.51
HMGXB3Q12766 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HMGXB3Q12766 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
HMGXB3Q12766 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HMGXB3Q12766 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC30.74■■■□□ 2.51
HMGXB3Q12766 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
HMGXB3Q12766 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC30.73■■■□□ 2.51
HMGXB3Q12766 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
HMGXB3Q12766 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
HMGXB3Q12766 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
HMGXB3Q12766 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms