Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDH1Q08174 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 AL138831.2-201ENST00000606564 490 ntBASIC17.08■□□□□ 0.32
PCDH1Q08174 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 AL592071.1-201ENST00000611956 408 ntBASIC17.08■□□□□ 0.32
PCDH1Q08174 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH1Q08174 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
PCDH1Q08174 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH1Q08174 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 PRORSD1P-202ENST00000563365 2154 ntBASIC17.07■□□□□ 0.32
PCDH1Q08174 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PCDH1Q08174 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH1Q08174 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH1Q08174 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDH1Q08174 AC002558.1-201ENST00000488906 803 ntBASIC17.07■□□□□ 0.32
PCDH1Q08174 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH1Q08174 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PCDH1Q08174 NTF6B-201ENST00000591913 560 ntBASIC17.07■□□□□ 0.32
PCDH1Q08174 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH1Q08174 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PCDH1Q08174 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH1Q08174 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH1Q08174 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH1Q08174 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDH1Q08174 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH1Q08174 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH1Q08174 AC122714.2-201ENST00000502787 707 ntBASIC17.06■□□□□ 0.32
PCDH1Q08174 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH1Q08174 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH1Q08174 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH1Q08174 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 AL645608.8-201ENST00000606034 2086 ntBASIC17.06■□□□□ 0.32
PCDH1Q08174 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 AC010460.3-201ENST00000511359 1579 ntBASIC17.06■□□□□ 0.32
PCDH1Q08174 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDH1Q08174 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH1Q08174 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms