Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
H3F3AP84243 AC005104.2-201ENST00000427818 678 ntBASIC15.83■□□□□ 0.12
H3F3AP84243 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.83■□□□□ 0.12
H3F3AP84243 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.83■□□□□ 0.12
H3F3AP84243 LINC01451-201ENST00000623792 534 ntBASIC15.83■□□□□ 0.12
H3F3AP84243 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.83■□□□□ 0.12
H3F3AP84243 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.83■□□□□ 0.12
H3F3AP84243 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
H3F3AP84243 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
H3F3AP84243 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
H3F3AP84243 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.83■□□□□ 0.12
H3F3AP84243 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.83■□□□□ 0.12
H3F3AP84243 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
H3F3AP84243 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 AC005332.8-201ENST00000622750 2735 ntBASIC15.82■□□□□ 0.12
H3F3AP84243 LINC00304-203ENST00000565008 1864 ntBASIC15.82■□□□□ 0.12
H3F3AP84243 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.82■□□□□ 0.12
H3F3AP84243 FAM220CP-201ENST00000395253 831 ntBASIC15.82■□□□□ 0.12
H3F3AP84243 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.82■□□□□ 0.12
H3F3AP84243 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.82■□□□□ 0.12
H3F3AP84243 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.82■□□□□ 0.12
H3F3AP84243 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.82■□□□□ 0.12
H3F3AP84243 MIR3652-201ENST00000579335 131 ntBASIC15.82■□□□□ 0.12
H3F3AP84243 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.82■□□□□ 0.12
H3F3AP84243 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.82■□□□□ 0.12
H3F3AP84243 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
H3F3AP84243 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
H3F3AP84243 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.82■□□□□ 0.12
H3F3AP84243 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 INTS4P1-201ENST00000438455 1935 ntBASIC15.82■□□□□ 0.12
H3F3AP84243 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
H3F3AP84243 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 AL355312.1-201ENST00000407115 2176 ntBASIC15.82■□□□□ 0.12
H3F3AP84243 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
H3F3AP84243 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
H3F3AP84243 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
H3F3AP84243 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
H3F3AP84243 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.81■□□□□ 0.12
H3F3AP84243 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.81■□□□□ 0.12
H3F3AP84243 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.81■□□□□ 0.12
H3F3AP84243 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.81■□□□□ 0.12
H3F3AP84243 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
H3F3AP84243 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.81■□□□□ 0.12
H3F3AP84243 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.81■□□□□ 0.12
H3F3AP84243 AC114341.1-201ENST00000618070 349 ntBASIC15.81■□□□□ 0.12
H3F3AP84243 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
H3F3AP84243 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
H3F3AP84243 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
H3F3AP84243 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms