Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 AL390719.2-201ENST00000606993 987 ntBASIC17.88■□□□□ 0.45
PRAMEP78395 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 KRT8P47-201ENST00000604727 1398 ntBASIC17.88■□□□□ 0.45
PRAMEP78395 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEP78395 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEP78395 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRAMEP78395 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 AL355312.1-201ENST00000407115 2176 ntBASIC17.87■□□□□ 0.45
PRAMEP78395 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PRAMEP78395 SPDYE13P-201ENST00000445314 798 ntBASIC17.87■□□□□ 0.45
PRAMEP78395 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 AC112698.1-201ENST00000510299 916 ntBASIC17.87■□□□□ 0.45
PRAMEP78395 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.87■□□□□ 0.45
PRAMEP78395 RNF126P1-202ENST00000569893 925 ntBASIC17.87■□□□□ 0.45
PRAMEP78395 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.87■□□□□ 0.45
PRAMEP78395 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.87■□□□□ 0.45
PRAMEP78395 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
PRAMEP78395 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEP78395 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEP78395 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
PRAMEP78395 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.86■□□□□ 0.45
PRAMEP78395 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.86■□□□□ 0.45
PRAMEP78395 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PRAMEP78395 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEP78395 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PRAMEP78395 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEP78395 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRAMEP78395 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.85■□□□□ 0.45
PRAMEP78395 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRAMEP78395 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PRAMEP78395 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PRAMEP78395 DDX43P3-201ENST00000441064 443 ntBASIC17.85■□□□□ 0.45
PRAMEP78395 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms