Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 GMCL1P1-201ENST00000463439 1581 ntBASIC16.94■□□□□ 0.3
CLDN6P56747 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 ANO7L1-203ENST00000602586 1720 ntBASIC16.94■□□□□ 0.3
CLDN6P56747 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN6P56747 IGLL3P-201ENST00000412472 434 ntBASIC16.94■□□□□ 0.3
CLDN6P56747 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.94■□□□□ 0.3
CLDN6P56747 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN6P56747 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 SIGLEC16-201ENST00000599858 1437 ntBASIC16.94■□□□□ 0.3
CLDN6P56747 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN6P56747 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN6P56747 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN6P56747 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CLDN6P56747 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 AC093503.3-201ENST00000624917 2352 ntBASIC16.93■□□□□ 0.3
CLDN6P56747 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN6P56747 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN6P56747 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 PRYP5-201ENST00000451909 266 ntBASIC16.93■□□□□ 0.3
CLDN6P56747 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN6P56747 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN6P56747 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 ELL2P1-201ENST00000413990 1906 ntBASIC16.93■□□□□ 0.3
CLDN6P56747 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN6P56747 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CLDN6P56747 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN6P56747 AC126763.1-201ENST00000552015 2118 ntBASIC16.93■□□□□ 0.3
CLDN6P56747 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN6P56747 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
CLDN6P56747 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 MIR770-201ENST00000390219 98 ntBASIC16.92■□□□□ 0.3
CLDN6P56747 AL035633.1-201ENST00000406139 838 ntBASIC16.92■□□□□ 0.3
CLDN6P56747 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN6P56747 AC096633.1-201ENST00000422446 749 ntBASIC16.92■□□□□ 0.3
CLDN6P56747 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN6P56747 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN6P56747 RPS15P9-201ENST00000494093 319 ntBASIC16.92■□□□□ 0.3
CLDN6P56747 AC122714.2-201ENST00000502787 707 ntBASIC16.92■□□□□ 0.3
CLDN6P56747 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN6P56747 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 AL589182.2-201ENST00000619332 1049 ntBASIC16.92■□□□□ 0.3
CLDN6P56747 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN6P56747 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN6P56747 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms