Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.9■□□□□ 0.14
CASP6P55212 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.9■□□□□ 0.14
CASP6P55212 YBX2P1-201ENST00000394192 760 ntBASIC15.9■□□□□ 0.14
CASP6P55212 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.9■□□□□ 0.14
CASP6P55212 RPS8P6-201ENST00000426177 609 ntBASIC15.9■□□□□ 0.14
CASP6P55212 GPX1P2-201ENST00000429271 606 ntBASIC15.9■□□□□ 0.14
CASP6P55212 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.9■□□□□ 0.14
CASP6P55212 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CASP6P55212 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.9■□□□□ 0.14
CASP6P55212 AP000867.4-201ENST00000641616 219 ntBASIC15.9■□□□□ 0.14
CASP6P55212 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.9■□□□□ 0.14
CASP6P55212 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CASP6P55212 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.9■□□□□ 0.14
CASP6P55212 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CASP6P55212 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.89■□□□□ 0.13
CASP6P55212 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.89■□□□□ 0.13
CASP6P55212 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CASP6P55212 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.89■□□□□ 0.13
CASP6P55212 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CASP6P55212 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.89■□□□□ 0.13
CASP6P55212 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.89■□□□□ 0.13
CASP6P55212 RPSAP43-201ENST00000402237 625 ntBASIC15.89■□□□□ 0.13
CASP6P55212 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CASP6P55212 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.89■□□□□ 0.13
CASP6P55212 AC007967.3-201ENST00000434308 558 ntBASIC15.89■□□□□ 0.13
CASP6P55212 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.89■□□□□ 0.13
CASP6P55212 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.89■□□□□ 0.13
CASP6P55212 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.89■□□□□ 0.13
CASP6P55212 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.89■□□□□ 0.13
CASP6P55212 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.89■□□□□ 0.13
CASP6P55212 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 MTDHP5-201ENST00000598980 586 ntBASIC15.89■□□□□ 0.13
CASP6P55212 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.89■□□□□ 0.13
CASP6P55212 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 AL049812.1-201ENST00000432563 2267 ntBASIC15.89■□□□□ 0.13
CASP6P55212 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CASP6P55212 AC022898.2-201ENST00000616822 1312 ntBASIC15.89■□□□□ 0.13
CASP6P55212 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.88■□□□□ 0.13
CASP6P55212 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.88■□□□□ 0.13
CASP6P55212 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CASP6P55212 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CASP6P55212 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.88■□□□□ 0.13
CASP6P55212 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 AC079776.2-201ENST00000641154 1609 ntBASIC15.88■□□□□ 0.13
CASP6P55212 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
CASP6P55212 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.88■□□□□ 0.13
CASP6P55212 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 AC007967.2-201ENST00000432613 625 ntBASIC15.88■□□□□ 0.13
CASP6P55212 AC103564.2-201ENST00000432853 1299 ntBASIC15.88■□□□□ 0.13
CASP6P55212 AC004967.1-201ENST00000453589 447 ntBASIC15.88■□□□□ 0.13
CASP6P55212 BX005266.1-201ENST00000473402 457 ntBASIC15.88■□□□□ 0.13
CASP6P55212 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CASP6P55212 AC122714.2-201ENST00000502787 707 ntBASIC15.88■□□□□ 0.13
CASP6P55212 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.88■□□□□ 0.13
CASP6P55212 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.88■□□□□ 0.13
CASP6P55212 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.88■□□□□ 0.13
CASP6P55212 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.88■□□□□ 0.13
CASP6P55212 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.88■□□□□ 0.13
CASP6P55212 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.88■□□□□ 0.13
CASP6P55212 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.88■□□□□ 0.13
CASP6P55212 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CASP6P55212 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms