Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.1■□□□□ 0.49
ATXN3P54252 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.1■□□□□ 0.49
ATXN3P54252 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.1■□□□□ 0.49
ATXN3P54252 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATXN3P54252 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.1■□□□□ 0.49
ATXN3P54252 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ATXN3P54252 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ATXN3P54252 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 PMS2P7-201ENST00000506558 1336 ntBASIC18.1■□□□□ 0.49
ATXN3P54252 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.1■□□□□ 0.49
ATXN3P54252 FAM220CP-201ENST00000395253 831 ntBASIC18.1■□□□□ 0.49
ATXN3P54252 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.1■□□□□ 0.49
ATXN3P54252 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.1■□□□□ 0.49
ATXN3P54252 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.1■□□□□ 0.49
ATXN3P54252 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATXN3P54252 AC020916.1-201ENST00000587762 1774 ntBASIC18.09■□□□□ 0.49
ATXN3P54252 AC099398.1-201ENST00000567919 2776 ntBASIC18.09■□□□□ 0.49
ATXN3P54252 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.09■□□□□ 0.49
ATXN3P54252 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 AC096582.2-201ENST00000510860 516 ntBASIC18.09■□□□□ 0.49
ATXN3P54252 POLD2P1-201ENST00000511220 997 ntBASIC18.09■□□□□ 0.49
ATXN3P54252 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.09■□□□□ 0.49
ATXN3P54252 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 AP005901.3-202ENST00000581653 237 ntBASIC18.09■□□□□ 0.49
ATXN3P54252 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.09■□□□□ 0.49
ATXN3P54252 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.09■□□□□ 0.49
ATXN3P54252 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.09■□□□□ 0.49
ATXN3P54252 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATXN3P54252 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.09■□□□□ 0.49
ATXN3P54252 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
ATXN3P54252 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ATXN3P54252 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ATXN3P54252 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.08■□□□□ 0.49
ATXN3P54252 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.08■□□□□ 0.49
ATXN3P54252 ZNF259P1-201ENST00000407656 1365 ntBASIC18.08■□□□□ 0.49
ATXN3P54252 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATXN3P54252 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.08■□□□□ 0.48
ATXN3P54252 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 AC073648.2-201ENST00000510116 352 ntBASIC18.08■□□□□ 0.48
ATXN3P54252 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.08■□□□□ 0.48
ATXN3P54252 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.08■□□□□ 0.48
ATXN3P54252 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.08■□□□□ 0.48
ATXN3P54252 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
ATXN3P54252 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ATXN3P54252 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.08■□□□□ 0.48
ATXN3P54252 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.08■□□□□ 0.48
ATXN3P54252 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.08■□□□□ 0.48
ATXN3P54252 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.08■□□□□ 0.48
ATXN3P54252 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ATXN3P54252 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.08■□□□□ 0.48
ATXN3P54252 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATXN3P54252 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
ATXN3P54252 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.07■□□□□ 0.48
ATXN3P54252 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATXN3P54252 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms