Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACLYP53396 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACLYP53396 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACLYP53396 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 HLA-J-203ENST00000494367 1087 ntBASIC19.39■□□□□ 0.69
ACLYP53396 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.39■□□□□ 0.69
ACLYP53396 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 AC068137.2-201ENST00000605408 478 ntBASIC19.39■□□□□ 0.69
ACLYP53396 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ACLYP53396 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ACLYP53396 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ACLYP53396 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.39■□□□□ 0.69
ACLYP53396 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACLYP53396 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.39■□□□□ 0.69
ACLYP53396 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.39■□□□□ 0.69
ACLYP53396 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ACLYP53396 AC100803.2-201ENST00000562459 1963 ntBASIC19.39■□□□□ 0.69
ACLYP53396 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
ACLYP53396 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.38■□□□□ 0.69
ACLYP53396 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ACLYP53396 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.38■□□□□ 0.69
ACLYP53396 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.38■□□□□ 0.69
ACLYP53396 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.38■□□□□ 0.69
ACLYP53396 COX20P2-201ENST00000452636 358 ntBASIC19.38■□□□□ 0.69
ACLYP53396 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.38■□□□□ 0.69
ACLYP53396 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.38■□□□□ 0.69
ACLYP53396 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
ACLYP53396 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.38■□□□□ 0.69
ACLYP53396 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.38■□□□□ 0.69
ACLYP53396 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.38■□□□□ 0.69
ACLYP53396 REXO1L3P-201ENST00000622202 1288 ntBASIC19.38■□□□□ 0.69
ACLYP53396 AC009949.1-201ENST00000623048 1830 ntBASIC19.38■□□□□ 0.69
ACLYP53396 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.38■□□□□ 0.69
ACLYP53396 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ACLYP53396 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.37■□□□□ 0.69
ACLYP53396 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.37■□□□□ 0.69
ACLYP53396 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.37■□□□□ 0.69
ACLYP53396 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 DDX43P3-201ENST00000441064 443 ntBASIC19.37■□□□□ 0.69
ACLYP53396 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.37■□□□□ 0.69
ACLYP53396 AC025678.2-201ENST00000562061 970 ntBASIC19.37■□□□□ 0.69
ACLYP53396 AC022145.2-201ENST00000598203 171 ntBASIC19.37■□□□□ 0.69
ACLYP53396 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.37■□□□□ 0.69
ACLYP53396 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ACLYP53396 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
ACLYP53396 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ACLYP53396 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ACLYP53396 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.36■□□□□ 0.69
ACLYP53396 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.36■□□□□ 0.69
ACLYP53396 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.36■□□□□ 0.69
ACLYP53396 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.36■□□□□ 0.69
ACLYP53396 AC109322.1-201ENST00000524499 1264 ntBASIC19.36■□□□□ 0.69
ACLYP53396 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.36■□□□□ 0.69
ACLYP53396 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.36■□□□□ 0.69
ACLYP53396 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ACLYP53396 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 AL121761.2-201ENST00000598007 1648 ntBASIC19.36■□□□□ 0.69
ACLYP53396 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACLYP53396 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACLYP53396 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms