Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LBX1P52954 RN7SL190P-201ENST00000582519 257 ntBASIC19.78■□□□□ 0.76
LBX1P52954 SPDYE12P-201ENST00000618416 771 ntBASIC19.78■□□□□ 0.76
LBX1P52954 AL109936.8-201ENST00000641772 604 ntBASIC19.78■□□□□ 0.76
LBX1P52954 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.78■□□□□ 0.76
LBX1P52954 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.78■□□□□ 0.76
LBX1P52954 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LBX1P52954 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LBX1P52954 AC129492.6-201ENST00000611383 1305 ntBASIC19.77■□□□□ 0.76
LBX1P52954 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LBX1P52954 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
LBX1P52954 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.77■□□□□ 0.76
LBX1P52954 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.77■□□□□ 0.76
LBX1P52954 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.77■□□□□ 0.76
LBX1P52954 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.77■□□□□ 0.76
LBX1P52954 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.77■□□□□ 0.76
LBX1P52954 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.77■□□□□ 0.76
LBX1P52954 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.77■□□□□ 0.76
LBX1P52954 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.77■□□□□ 0.76
LBX1P52954 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LBX1P52954 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
LBX1P52954 AC093677.2-201ENST00000600169 1863 ntBASIC19.77■□□□□ 0.76
LBX1P52954 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.77■□□□□ 0.75
LBX1P52954 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LBX1P52954 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LBX1P52954 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LBX1P52954 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
LBX1P52954 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.76■□□□□ 0.75
LBX1P52954 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.76■□□□□ 0.75
LBX1P52954 AC109462.3-201ENST00000573934 613 ntBASIC19.76■□□□□ 0.75
LBX1P52954 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.76■□□□□ 0.75
LBX1P52954 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 AC008738.7-201ENST00000609744 511 ntBASIC19.76■□□□□ 0.75
LBX1P52954 AL138828.2-201ENST00000615812 383 ntBASIC19.76■□□□□ 0.75
LBX1P52954 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LBX1P52954 MIR6869-201ENST00000619434 62 ntBASIC19.76■□□□□ 0.75
LBX1P52954 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LBX1P52954 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.76■□□□□ 0.75
LBX1P52954 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.75■□□□□ 0.75
LBX1P52954 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.75■□□□□ 0.75
LBX1P52954 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.75■□□□□ 0.75
LBX1P52954 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 MIR6775-201ENST00000617557 69 ntBASIC19.75■□□□□ 0.75
LBX1P52954 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.75■□□□□ 0.75
LBX1P52954 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LBX1P52954 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.75■□□□□ 0.75
LBX1P52954 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LBX1P52954 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms