Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
SMSP52788 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.61■□□□□ 0.25
SMSP52788 HLA-F-220ENST00000434407 884 ntBASIC16.61■□□□□ 0.25
SMSP52788 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.61■□□□□ 0.25
SMSP52788 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.61■□□□□ 0.25
SMSP52788 SEC1P-202ENST00000473944 940 ntBASIC16.61■□□□□ 0.25
SMSP52788 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.61■□□□□ 0.25
SMSP52788 AP000867.3-201ENST00000524675 377 ntBASIC16.61■□□□□ 0.25
SMSP52788 MIR3917-201ENST00000580971 93 ntBASIC16.61■□□□□ 0.25
SMSP52788 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.61■□□□□ 0.25
SMSP52788 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMSP52788 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SMSP52788 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
SMSP52788 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SMSP52788 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SMSP52788 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.61■□□□□ 0.25
SMSP52788 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMSP52788 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SMSP52788 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 MIR662-201ENST00000384847 95 ntBASIC16.6■□□□□ 0.25
SMSP52788 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.6■□□□□ 0.25
SMSP52788 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 LINC00265-3P-201ENST00000447588 903 ntBASIC16.6■□□□□ 0.25
SMSP52788 UNC93B7-201ENST00000509439 705 ntBASIC16.6■□□□□ 0.25
SMSP52788 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.6■□□□□ 0.25
SMSP52788 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 AL157888.1-201ENST00000631930 593 ntBASIC16.6■□□□□ 0.25
SMSP52788 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SMSP52788 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.6■□□□□ 0.25
SMSP52788 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SMSP52788 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.59■□□□□ 0.25
SMSP52788 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.59■□□□□ 0.25
SMSP52788 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.59■□□□□ 0.25
SMSP52788 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.59■□□□□ 0.25
SMSP52788 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.59■□□□□ 0.25
SMSP52788 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SMSP52788 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.59■□□□□ 0.25
SMSP52788 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.59■□□□□ 0.25
SMSP52788 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 TSPY19P-201ENST00000418461 509 ntBASIC16.59■□□□□ 0.25
SMSP52788 DRAXINP1-201ENST00000437611 948 ntBASIC16.59■□□□□ 0.25
SMSP52788 TSPY18P-201ENST00000441642 509 ntBASIC16.59■□□□□ 0.25
SMSP52788 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.59■□□□□ 0.25
SMSP52788 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.59■□□□□ 0.25
SMSP52788 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.59■□□□□ 0.25
SMSP52788 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.59■□□□□ 0.25
SMSP52788 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SMSP52788 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.59■□□□□ 0.25
SMSP52788 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms