Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN3P51790 AC117500.6-201ENST00000624871 588 ntBASIC19.41■□□□□ 0.7
CLCN3P51790 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CLCN3P51790 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN3P51790 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN3P51790 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN3P51790 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CLCN3P51790 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN3P51790 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN3P51790 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLCN3P51790 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN3P51790 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 ZNF259P1-201ENST00000407656 1365 ntBASIC19.4■□□□□ 0.7
CLCN3P51790 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN3P51790 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CLCN3P51790 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN3P51790 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN3P51790 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
CLCN3P51790 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.39■□□□□ 0.7
CLCN3P51790 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN3P51790 AC003669.1-201ENST00000334569 611 ntBASIC19.39■□□□□ 0.69
CLCN3P51790 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.39■□□□□ 0.69
CLCN3P51790 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.39■□□□□ 0.69
CLCN3P51790 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 AC145285.3-201ENST00000564603 959 ntBASIC19.39■□□□□ 0.69
CLCN3P51790 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.39■□□□□ 0.69
CLCN3P51790 STK25P1-201ENST00000585406 838 ntBASIC19.39■□□□□ 0.69
CLCN3P51790 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
CLCN3P51790 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.39■□□□□ 0.69
CLCN3P51790 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CLCN3P51790 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN3P51790 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CLCN3P51790 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN3P51790 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN3P51790 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN3P51790 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.38■□□□□ 0.69
CLCN3P51790 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCN3P51790 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 KRT18P27-201ENST00000427733 1299 ntBASIC19.38■□□□□ 0.69
CLCN3P51790 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CLCN3P51790 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.38■□□□□ 0.69
CLCN3P51790 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLCN3P51790 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCN3P51790 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.38■□□□□ 0.69
CLCN3P51790 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN3P51790 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.38■□□□□ 0.69
CLCN3P51790 AC034105.1-201ENST00000563488 319 ntBASIC19.38■□□□□ 0.69
CLCN3P51790 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.38■□□□□ 0.69
CLCN3P51790 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms