Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.67■□□□□ 0.26
CLK1P49759 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.67■□□□□ 0.26
CLK1P49759 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.67■□□□□ 0.26
CLK1P49759 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CLK1P49759 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CLK1P49759 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.67■□□□□ 0.26
CLK1P49759 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CLK1P49759 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.67■□□□□ 0.26
CLK1P49759 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.67■□□□□ 0.26
CLK1P49759 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.67■□□□□ 0.26
CLK1P49759 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.67■□□□□ 0.26
CLK1P49759 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLK1P49759 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLK1P49759 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLK1P49759 AC018695.7-201ENST00000624587 2492 ntBASIC16.67■□□□□ 0.26
CLK1P49759 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLK1P49759 TERF1P1-201ENST00000311003 1181 ntBASIC16.66■□□□□ 0.26
CLK1P49759 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
CLK1P49759 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK1P49759 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK1P49759 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.66■□□□□ 0.26
CLK1P49759 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CLK1P49759 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
CLK1P49759 AC073508.3-201ENST00000619697 1419 ntBASIC16.66■□□□□ 0.26
CLK1P49759 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 AC022211.2-201ENST00000585075 2527 ntBASIC16.66■□□□□ 0.26
CLK1P49759 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.66■□□□□ 0.26
CLK1P49759 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLK1P49759 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 FLJ13224-201ENST00000313737 1514 ntBASIC16.65■□□□□ 0.26
CLK1P49759 AL163051.1-201ENST00000569214 1512 ntBASIC16.65■□□□□ 0.26
CLK1P49759 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.65■□□□□ 0.26
CLK1P49759 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK1P49759 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK1P49759 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 COX11P1-201ENST00000489116 835 ntBASIC16.65■□□□□ 0.26
CLK1P49759 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK1P49759 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK1P49759 AC010203.1-204ENST00000548782 407 ntBASIC16.65■□□□□ 0.26
CLK1P49759 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.65■□□□□ 0.26
CLK1P49759 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.65■□□□□ 0.26
CLK1P49759 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CLK1P49759 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 AC140113.3-201ENST00000605663 199 ntBASIC16.65■□□□□ 0.26
CLK1P49759 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.65■□□□□ 0.26
CLK1P49759 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CLK1P49759 AC092865.7-201ENST00000641832 219 ntBASIC16.65■□□□□ 0.26
CLK1P49759 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms