Protein–RNA interactions for Protein: P46531

NOTCH1, Neurogenic locus notch homolog protein 1, humanhuman

Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1P46531 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 ATP5G2P4-201ENST00000442175 420 ntBASIC13.06□□□□□ -0.32
NOTCH1P46531 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.06□□□□□ -0.32
NOTCH1P46531 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.06□□□□□ -0.32
NOTCH1P46531 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.06□□□□□ -0.32
NOTCH1P46531 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.06□□□□□ -0.32
NOTCH1P46531 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13.06□□□□□ -0.32
NOTCH1P46531 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 AC008677.1-201ENST00000519230 1561 ntBASIC13.06□□□□□ -0.32
NOTCH1P46531 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NOTCH1P46531 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.06□□□□□ -0.32
NOTCH1P46531 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 AC003669.1-201ENST00000334569 611 ntBASIC13.06□□□□□ -0.32
NOTCH1P46531 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.06□□□□□ -0.32
NOTCH1P46531 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 HILS1-202ENST00000545329 423 ntBASIC13.06□□□□□ -0.32
NOTCH1P46531 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 ACTL9-202ENST00000612068 1252 ntBASIC13.06□□□□□ -0.32
NOTCH1P46531 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
NOTCH1P46531 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NOTCH1P46531 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC13.06□□□□□ -0.32
NOTCH1P46531 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
NOTCH1P46531 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.06□□□□□ -0.32
NOTCH1P46531 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NOTCH1P46531 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NOTCH1P46531 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
NOTCH1P46531 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
NOTCH1P46531 KRT8P48-201ENST00000515599 1220 ntBASIC13.05□□□□□ -0.32
NOTCH1P46531 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.05□□□□□ -0.32
NOTCH1P46531 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
NOTCH1P46531 AC007064.4-201ENST00000637740 555 ntBASIC13.05□□□□□ -0.32
NOTCH1P46531 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC13.05□□□□□ -0.32
NOTCH1P46531 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
NOTCH1P46531 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.05□□□□□ -0.32
NOTCH1P46531 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
NOTCH1P46531 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 AC005237.2-201ENST00000434368 219 ntBASIC13.05□□□□□ -0.32
NOTCH1P46531 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.05□□□□□ -0.32
NOTCH1P46531 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.05□□□□□ -0.32
NOTCH1P46531 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NOTCH1P46531 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 MIR1909-201ENST00000411312 80 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.04□□□□□ -0.32
NOTCH1P46531 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.04□□□□□ -0.32
NOTCH1P46531 SPDYE11-202ENST00000450699 704 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.04□□□□□ -0.32
NOTCH1P46531 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 LINC01225-203ENST00000563550 1244 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 SPDYE9P-201ENST00000570642 692 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 AL132655.2-201ENST00000596276 594 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 SPDYE10P-202ENST00000612005 668 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 SPDYE8P-202ENST00000612377 668 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 TUBB3P1-201ENST00000405796 1332 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NOTCH1P46531 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.04□□□□□ -0.32
NOTCH1P46531 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.04□□□□□ -0.32
NOTCH1P46531 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.04□□□□□ -0.32
NOTCH1P46531 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.04□□□□□ -0.32
NOTCH1P46531 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NOTCH1P46531 GPS2P2-201ENST00000430745 888 ntBASIC13.04□□□□□ -0.32
NOTCH1P46531 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.04□□□□□ -0.32
NOTCH1P46531 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.04□□□□□ -0.32
NOTCH1P46531 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NOTCH1P46531 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.04□□□□□ -0.32
NOTCH1P46531 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NOTCH1P46531 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms