Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIK1P39086 BX276092.7-203ENST00000637198 1536 ntBASIC18.65■□□□□ 0.58
GRIK1P39086 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.65■□□□□ 0.58
GRIK1P39086 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIK1P39086 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIK1P39086 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 KRT18P67-201ENST00000432816 1264 ntBASIC18.65■□□□□ 0.58
GRIK1P39086 DDX43P3-201ENST00000441064 443 ntBASIC18.65■□□□□ 0.58
GRIK1P39086 RNPS1P1-201ENST00000507437 918 ntBASIC18.65■□□□□ 0.58
GRIK1P39086 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.65■□□□□ 0.58
GRIK1P39086 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.65■□□□□ 0.58
GRIK1P39086 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.65■□□□□ 0.58
GRIK1P39086 AL773604.1-201ENST00000617417 272 ntBASIC18.65■□□□□ 0.58
GRIK1P39086 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.65■□□□□ 0.58
GRIK1P39086 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIK1P39086 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.65■□□□□ 0.58
GRIK1P39086 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GRIK1P39086 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GRIK1P39086 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
GRIK1P39086 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GRIK1P39086 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
GRIK1P39086 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
GRIK1P39086 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.64■□□□□ 0.57
GRIK1P39086 AC135050.7-201ENST00000624508 2218 ntBASIC18.64■□□□□ 0.57
GRIK1P39086 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.64■□□□□ 0.57
GRIK1P39086 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.64■□□□□ 0.57
GRIK1P39086 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.64■□□□□ 0.57
GRIK1P39086 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.64■□□□□ 0.57
GRIK1P39086 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.64■□□□□ 0.57
GRIK1P39086 AD001527.2-201ENST00000622994 785 ntBASIC18.64■□□□□ 0.57
GRIK1P39086 AC148477.8-201ENST00000624298 468 ntBASIC18.64■□□□□ 0.57
GRIK1P39086 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
GRIK1P39086 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
GRIK1P39086 HLA-A-201ENST00000376802 1334 ntBASIC18.64■□□□□ 0.57
GRIK1P39086 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.64■□□□□ 0.57
GRIK1P39086 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.64■□□□□ 0.57
GRIK1P39086 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GRIK1P39086 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.64■□□□□ 0.57
GRIK1P39086 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.64■□□□□ 0.57
GRIK1P39086 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.64■□□□□ 0.57
GRIK1P39086 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 SART3-203ENST00000546611 1184 ntBASIC18.63■□□□□ 0.57
GRIK1P39086 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.63■□□□□ 0.57
GRIK1P39086 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.63■□□□□ 0.57
GRIK1P39086 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GRIK1P39086 PMPCAP1-201ENST00000508114 1576 ntBASIC18.63■□□□□ 0.57
GRIK1P39086 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
GRIK1P39086 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.63■□□□□ 0.57
GRIK1P39086 AL354751.1-201ENST00000412768 1863 ntBASIC18.63■□□□□ 0.57
GRIK1P39086 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIK1P39086 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
GRIK1P39086 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GRIK1P39086 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms