Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMGCLP35914 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 NUS1P2-201ENST00000417358 873 ntBASIC17.61■□□□□ 0.41
HMGCLP35914 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGCLP35914 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCLP35914 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.61■□□□□ 0.41
HMGCLP35914 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCLP35914 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCLP35914 AC138894.3-201ENST00000603787 634 ntBASIC17.61■□□□□ 0.41
HMGCLP35914 AL121772.3-201ENST00000610840 674 ntBASIC17.61■□□□□ 0.41
HMGCLP35914 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGCLP35914 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMGCLP35914 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCLP35914 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGCLP35914 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLP35914 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLP35914 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGCLP35914 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGCLP35914 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.6■□□□□ 0.41
HMGCLP35914 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLP35914 PRELID1P1-202ENST00000567272 903 ntBASIC17.6■□□□□ 0.41
HMGCLP35914 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.6■□□□□ 0.41
HMGCLP35914 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 AD001527.2-201ENST00000622994 785 ntBASIC17.6■□□□□ 0.41
HMGCLP35914 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 AL353593.2-201ENST00000602529 1483 ntBASIC17.6■□□□□ 0.41
HMGCLP35914 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCLP35914 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLP35914 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 PCDHB18P-201ENST00000524813 2368 ntBASIC17.6■□□□□ 0.41
HMGCLP35914 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCLP35914 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.6■□□□□ 0.41
HMGCLP35914 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCLP35914 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCLP35914 AC005332.8-201ENST00000622750 2735 ntBASIC17.59■□□□□ 0.41
HMGCLP35914 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HMGCLP35914 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCLP35914 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCLP35914 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMGCLP35914 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCLP35914 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 MYCLP1-201ENST00000372451 1075 ntBASIC17.59■□□□□ 0.41
HMGCLP35914 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 TSPY19P-201ENST00000418461 509 ntBASIC17.59■□□□□ 0.41
HMGCLP35914 TSPY18P-201ENST00000441642 509 ntBASIC17.59■□□□□ 0.41
HMGCLP35914 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCLP35914 IGHV3-52-201ENST00000519770 353 ntBASIC17.59■□□□□ 0.41
HMGCLP35914 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.59■□□□□ 0.41
HMGCLP35914 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCLP35914 CLEC4GP1-201ENST00000596555 870 ntBASIC17.59■□□□□ 0.41
HMGCLP35914 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCLP35914 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms