Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CASP1P29466 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CASP1P29466 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
CASP1P29466 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CASP1P29466 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.78■□□□□ 0.76
CASP1P29466 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.78■□□□□ 0.76
CASP1P29466 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.78■□□□□ 0.76
CASP1P29466 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CASP1P29466 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.78■□□□□ 0.76
CASP1P29466 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CASP1P29466 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CASP1P29466 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP1P29466 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP1P29466 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP1P29466 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP1P29466 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP1P29466 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.77■□□□□ 0.76
CASP1P29466 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP1P29466 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP1P29466 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP1P29466 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP1P29466 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP1P29466 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CASP1P29466 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CASP1P29466 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 LYSMD4-203ENST00000378904 2122 ntBASIC19.76■□□□□ 0.75
CASP1P29466 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CASP1P29466 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CASP1P29466 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 RN7SL606P-201ENST00000472779 293 ntBASIC19.76■□□□□ 0.75
CASP1P29466 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.76■□□□□ 0.75
CASP1P29466 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.76■□□□□ 0.75
CASP1P29466 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.76■□□□□ 0.75
CASP1P29466 LINC01451-201ENST00000623792 534 ntBASIC19.76■□□□□ 0.75
CASP1P29466 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CASP1P29466 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.76■□□□□ 0.75
CASP1P29466 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.76■□□□□ 0.75
CASP1P29466 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.76■□□□□ 0.75
CASP1P29466 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP1P29466 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP1P29466 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CASP1P29466 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP1P29466 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP1P29466 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP1P29466 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP1P29466 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP1P29466 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP1P29466 AC091607.1-201ENST00000490318 1060 ntBASIC19.75■□□□□ 0.75
CASP1P29466 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.75■□□□□ 0.75
CASP1P29466 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CASP1P29466 AL049597.2-201ENST00000565575 961 ntBASIC19.75■□□□□ 0.75
CASP1P29466 AC011498.5-201ENST00000592027 486 ntBASIC19.75■□□□□ 0.75
CASP1P29466 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.75■□□□□ 0.75
CASP1P29466 AC124864.1-201ENST00000623408 392 ntBASIC19.75■□□□□ 0.75
CASP1P29466 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms