Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 AC010507.1-201ENST00000633895 436 ntBASIC21.35■■□□□ 1.01
ATP2B4P23634 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2B4P23634 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP2B4P23634 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.35■■□□□ 1.01
ATP2B4P23634 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2B4P23634 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2B4P23634 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2B4P23634 BX323043.1-201ENST00000641006 1765 ntBASIC21.34■■□□□ 1.01
ATP2B4P23634 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ATP2B4P23634 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
ATP2B4P23634 RPS15-207ENST00000591032 550 ntTSL 3 BASIC21.34■■□□□ 1.01
ATP2B4P23634 AL078644.1-201ENST00000609881 752 ntBASIC21.34■■□□□ 1.01
ATP2B4P23634 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2B4P23634 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.34■■□□□ 1.01
ATP2B4P23634 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.34■■□□□ 1.01
ATP2B4P23634 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATP2B4P23634 AP000997.3-201ENST00000623333 2250 ntBASIC21.34■■□□□ 1.01
ATP2B4P23634 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
ATP2B4P23634 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2B4P23634 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP2B4P23634 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP2B4P23634 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
ATP2B4P23634 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.33■■□□□ 1.01
ATP2B4P23634 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
ATP2B4P23634 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ATP2B4P23634 RHOQP3-201ENST00000437982 621 ntBASIC21.33■■□□□ 1.01
ATP2B4P23634 PDPK2P-202ENST00000562415 1191 ntBASIC21.33■■□□□ 1.01
ATP2B4P23634 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.33■■□□□ 1.01
ATP2B4P23634 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.33■■□□□ 1.01
ATP2B4P23634 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
ATP2B4P23634 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.33■■□□□ 1
ATP2B4P23634 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.33■■□□□ 1
ATP2B4P23634 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.33■■□□□ 1
ATP2B4P23634 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.33■■□□□ 1
ATP2B4P23634 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.32■■□□□ 1
ATP2B4P23634 ELL2P1-201ENST00000413990 1906 ntBASIC21.32■■□□□ 1
ATP2B4P23634 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.32■■□□□ 1
ATP2B4P23634 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2B4P23634 ACTG1P4-201ENST00000425123 1122 ntBASIC21.32■■□□□ 1
ATP2B4P23634 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.32■■□□□ 1
ATP2B4P23634 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.32■■□□□ 1
ATP2B4P23634 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.32■■□□□ 1
ATP2B4P23634 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
ATP2B4P23634 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2B4P23634 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATP2B4P23634 KRT18P55-202ENST00000578578 1546 ntBASIC21.32■■□□□ 1
ATP2B4P23634 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2B4P23634 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2B4P23634 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATP2B4P23634 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP2B4P23634 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP2B4P23634 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
ATP2B4P23634 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.32■■□□□ 1
ATP2B4P23634 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.31■■□□□ 1
ATP2B4P23634 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B4P23634 BCAR1-209ENST00000546196 1340 ntBASIC21.31■■□□□ 1
ATP2B4P23634 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B4P23634 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2B4P23634 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B4P23634 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.31■■□□□ 1
ATP2B4P23634 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
ATP2B4P23634 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP2B4P23634 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.31■■□□□ 1
ATP2B4P23634 METTL21AP1-201ENST00000438852 635 ntBASIC21.31■■□□□ 1
ATP2B4P23634 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.31■■□□□ 1
ATP2B4P23634 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
ATP2B4P23634 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ATP2B4P23634 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms