Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 AC096633.1-201ENST00000422446 749 ntBASIC17.86■□□□□ 0.45
XPAP23025 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 AC007967.3-201ENST00000434308 558 ntBASIC17.86■□□□□ 0.45
XPAP23025 AC132008.2-207ENST00000454517 770 ntBASIC17.86■□□□□ 0.45
XPAP23025 SAPCD2P3-201ENST00000455031 850 ntBASIC17.86■□□□□ 0.45
XPAP23025 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.86■□□□□ 0.45
XPAP23025 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.86■□□□□ 0.45
XPAP23025 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.86■□□□□ 0.45
XPAP23025 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.86■□□□□ 0.45
XPAP23025 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.86■□□□□ 0.45
XPAP23025 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
XPAP23025 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
XPAP23025 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
XPAP23025 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
XPAP23025 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
XPAP23025 INTS4P1-201ENST00000438455 1935 ntBASIC17.85■□□□□ 0.45
XPAP23025 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.85■□□□□ 0.45
XPAP23025 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.85■□□□□ 0.45
XPAP23025 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.85■□□□□ 0.45
XPAP23025 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.85■□□□□ 0.45
XPAP23025 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.85■□□□□ 0.45
XPAP23025 AC138028.4-201ENST00000564984 1845 ntBASIC17.85■□□□□ 0.45
XPAP23025 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.85■□□□□ 0.45
XPAP23025 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.85■□□□□ 0.45
XPAP23025 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.85■□□□□ 0.45
XPAP23025 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
XPAP23025 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
XPAP23025 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.84■□□□□ 0.45
XPAP23025 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
XPAP23025 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.84■□□□□ 0.45
XPAP23025 BICD1-207ENST00000551848 1962 ntBASIC17.84■□□□□ 0.45
XPAP23025 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.84■□□□□ 0.45
XPAP23025 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.84■□□□□ 0.45
XPAP23025 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
XPAP23025 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
XPAP23025 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.84■□□□□ 0.45
XPAP23025 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.84■□□□□ 0.45
XPAP23025 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.84■□□□□ 0.45
XPAP23025 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.84■□□□□ 0.45
XPAP23025 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.84■□□□□ 0.45
XPAP23025 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.84■□□□□ 0.45
XPAP23025 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.84■□□□□ 0.45
XPAP23025 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
XPAP23025 REXO1L6P-202ENST00000619970 1078 ntBASIC17.84■□□□□ 0.45
XPAP23025 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.84■□□□□ 0.45
XPAP23025 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.84■□□□□ 0.45
XPAP23025 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XPAP23025 AC100803.2-201ENST00000562459 1963 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms