Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.75■□□□□ 0.27
NCK1P16333 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.75■□□□□ 0.27
NCK1P16333 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.75■□□□□ 0.27
NCK1P16333 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.75■□□□□ 0.27
NCK1P16333 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.75■□□□□ 0.27
NCK1P16333 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.75■□□□□ 0.27
NCK1P16333 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.75■□□□□ 0.27
NCK1P16333 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 FLJ38576-201ENST00000623820 2459 ntBASIC16.75■□□□□ 0.27
NCK1P16333 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NCK1P16333 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NCK1P16333 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.75■□□□□ 0.27
NCK1P16333 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
NCK1P16333 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 AC079328.2-201ENST00000561241 3354 ntBASIC16.74■□□□□ 0.27
NCK1P16333 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NCK1P16333 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 TSPY17P-201ENST00000450329 467 ntBASIC16.74■□□□□ 0.27
NCK1P16333 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.74■□□□□ 0.27
NCK1P16333 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 AP005242.2-201ENST00000580065 1175 ntBASIC16.74■□□□□ 0.27
NCK1P16333 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NCK1P16333 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 AC113410.3-201ENST00000623366 203 ntBASIC16.74■□□□□ 0.27
NCK1P16333 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NCK1P16333 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NCK1P16333 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NCK1P16333 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.74■□□□□ 0.27
NCK1P16333 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
NCK1P16333 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
NCK1P16333 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NCK1P16333 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.73■□□□□ 0.27
NCK1P16333 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
NCK1P16333 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
NCK1P16333 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.73■□□□□ 0.27
NCK1P16333 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.73■□□□□ 0.27
NCK1P16333 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.73■□□□□ 0.27
NCK1P16333 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NCK1P16333 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NCK1P16333 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NCK1P16333 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NCK1P16333 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NCK1P16333 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 CICP6-201ENST00000457191 2729 ntBASIC16.72■□□□□ 0.27
NCK1P16333 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.72■□□□□ 0.27
NCK1P16333 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.72■□□□□ 0.27
NCK1P16333 SLC25A1P2-201ENST00000430693 912 ntBASIC16.72■□□□□ 0.27
NCK1P16333 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.72■□□□□ 0.27
NCK1P16333 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NCK1P16333 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.72■□□□□ 0.27
NCK1P16333 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms