Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CFTRP13569 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFTRP13569 CRB3P1-201ENST00000449338 276 ntBASIC30.02■■■□□ 2.4
CFTRP13569 AC125807.1-201ENST00000483097 614 ntBASIC30.02■■■□□ 2.4
CFTRP13569 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC30.02■■■□□ 2.4
CFTRP13569 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFTRP13569 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CFTRP13569 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
CFTRP13569 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC30.02■■■□□ 2.4
CFTRP13569 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC30.02■■■□□ 2.4
CFTRP13569 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFTRP13569 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC30.01■■■□□ 2.4
CFTRP13569 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC30.01■■■□□ 2.4
CFTRP13569 AL671277.1-201ENST00000429656 993 ntBASIC30.01■■■□□ 2.4
CFTRP13569 AC005237.2-201ENST00000434368 219 ntBASIC30.01■■■□□ 2.4
CFTRP13569 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC30.01■■■□□ 2.4
CFTRP13569 AP005018.1-201ENST00000525475 301 ntBASIC30.01■■■□□ 2.4
CFTRP13569 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC30.01■■■□□ 2.4
CFTRP13569 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CFTRP13569 AL158211.3-201ENST00000607385 239 ntBASIC30.01■■■□□ 2.4
CFTRP13569 RAB34-224ENST00000636513 888 ntTSL 5 BASIC30.01■■■□□ 2.4
CFTRP13569 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CFTRP13569 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC30.01■■■□□ 2.39
CFTRP13569 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CFTRP13569 FO538757.1-201ENST00000623083 1397 ntBASIC30.01■■■□□ 2.39
CFTRP13569 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CFTRP13569 HARS-203ENST00000431330 1774 ntTSL 2 BASIC30.01■■■□□ 2.39
CFTRP13569 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
CFTRP13569 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC30.01■■■□□ 2.39
CFTRP13569 AL096828.2-201ENST00000567259 1965 ntBASIC30.01■■■□□ 2.39
CFTRP13569 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
CFTRP13569 RARRES2P8-201ENST00000566335 367 ntBASIC30■■■□□ 2.39
CFTRP13569 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC30■■■□□ 2.39
CFTRP13569 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CFTRP13569 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
CFTRP13569 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CFTRP13569 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CFTRP13569 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
CFTRP13569 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CFTRP13569 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC30■■■□□ 2.39
CFTRP13569 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CFTRP13569 FLYWCH1P1-201ENST00000460917 1874 ntBASIC30■■■□□ 2.39
CFTRP13569 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CFTRP13569 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
CFTRP13569 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
CFTRP13569 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CFTRP13569 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC29.99■■■□□ 2.39
CFTRP13569 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC29.99■■■□□ 2.39
CFTRP13569 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC29.99■■■□□ 2.39
CFTRP13569 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC29.99■■■□□ 2.39
CFTRP13569 LINC02560-201ENST00000596379 459 ntBASIC29.99■■■□□ 2.39
CFTRP13569 AKAP8P1-201ENST00000434743 1349 ntBASIC29.99■■■□□ 2.39
CFTRP13569 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC29.99■■■□□ 2.39
CFTRP13569 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC29.99■■■□□ 2.39
CFTRP13569 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CFTRP13569 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
CFTRP13569 SPCS2P4-201ENST00000436160 681 ntBASIC29.99■■■□□ 2.39
CFTRP13569 BAD-207ENST00000544785 525 ntTSL 3 BASIC29.99■■■□□ 2.39
CFTRP13569 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CFTRP13569 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC29.99■■■□□ 2.39
CFTRP13569 CECR7-204ENST00000609932 568 ntTSL 2 BASIC29.99■■■□□ 2.39
CFTRP13569 AL645728.2-201ENST00000641974 660 ntBASIC29.99■■■□□ 2.39
CFTRP13569 AC129492.6-201ENST00000611383 1305 ntBASIC29.99■■■□□ 2.39
CFTRP13569 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CFTRP13569 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 TREML5P-201ENST00000421694 576 ntBASIC29.98■■■□□ 2.39
CFTRP13569 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC29.98■■■□□ 2.39
CFTRP13569 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC29.98■■■□□ 2.39
CFTRP13569 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CFTRP13569 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CFTRP13569 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC29.97■■■□□ 2.39
CFTRP13569 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC29.97■■■□□ 2.39
CFTRP13569 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
CFTRP13569 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
CFTRP13569 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC29.97■■■□□ 2.39
CFTRP13569 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CFTRP13569 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CFTRP13569 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC29.97■■■□□ 2.39
CFTRP13569 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC29.96■■■□□ 2.39
CFTRP13569 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CFTRP13569 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CFTRP13569 ENSA-206ENST00000361631 725 ntTSL 2 BASIC29.96■■■□□ 2.39
CFTRP13569 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC29.96■■■□□ 2.39
CFTRP13569 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC29.96■■■□□ 2.39
CFTRP13569 SLC25A39P2-201ENST00000537614 270 ntBASIC29.96■■■□□ 2.39
CFTRP13569 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC29.96■■■□□ 2.39
CFTRP13569 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CFTRP13569 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
CFTRP13569 LINC01225-203ENST00000563550 1244 ntBASIC29.96■■■□□ 2.39
CFTRP13569 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC29.96■■■□□ 2.39
CFTRP13569 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC29.96■■■□□ 2.39
CFTRP13569 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms