Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.07■□□□□ 0.16
FREM3P0C091 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 AC145285.3-201ENST00000564603 959 ntBASIC16.07■□□□□ 0.16
FREM3P0C091 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.07■□□□□ 0.16
FREM3P0C091 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 MTDHP3-201ENST00000594186 672 ntBASIC16.07■□□□□ 0.16
FREM3P0C091 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.07■□□□□ 0.16
FREM3P0C091 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM3P0C091 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.07■□□□□ 0.16
FREM3P0C091 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.06■□□□□ 0.16
FREM3P0C091 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.06■□□□□ 0.16
FREM3P0C091 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 AP001269.4-201ENST00000609611 512 ntBASIC16.06■□□□□ 0.16
FREM3P0C091 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
FREM3P0C091 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
FREM3P0C091 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.06■□□□□ 0.16
FREM3P0C091 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
FREM3P0C091 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 AC148477.5-201ENST00000625164 1645 ntBASIC16.06■□□□□ 0.16
FREM3P0C091 BX276092.7-203ENST00000637198 1536 ntBASIC16.06■□□□□ 0.16
FREM3P0C091 AC243591.1-201ENST00000452967 1364 ntBASIC16.06■□□□□ 0.16
FREM3P0C091 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
FREM3P0C091 HNRNPDP1-201ENST00000439535 754 ntBASIC16.06■□□□□ 0.16
FREM3P0C091 AP001005.1-201ENST00000571755 1248 ntBASIC16.06■□□□□ 0.16
FREM3P0C091 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
FREM3P0C091 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM3P0C091 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM3P0C091 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM3P0C091 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
FREM3P0C091 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 RCN1P2-201ENST00000398357 915 ntBASIC16.05■□□□□ 0.16
FREM3P0C091 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
FREM3P0C091 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM3P0C091 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM3P0C091 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM3P0C091 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.04■□□□□ 0.16
FREM3P0C091 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.04■□□□□ 0.16
FREM3P0C091 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 AL031284.1-201ENST00000419297 478 ntBASIC16.04■□□□□ 0.16
FREM3P0C091 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.04■□□□□ 0.16
FREM3P0C091 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.04■□□□□ 0.16
FREM3P0C091 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 AC079776.2-201ENST00000641154 1609 ntBASIC16.04■□□□□ 0.16
FREM3P0C091 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.04■□□□□ 0.16
FREM3P0C091 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FREM3P0C091 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM3P0C091 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms