Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 STK25P1-201ENST00000585406 838 ntBASIC20.81■□□□□ 0.92
HLA-DOAP06340 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HLA-DOAP06340 KRT18P55-202ENST00000578578 1546 ntBASIC20.81■□□□□ 0.92
HLA-DOAP06340 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DOAP06340 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
HLA-DOAP06340 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DOAP06340 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HLA-DOAP06340 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.81■□□□□ 0.92
HLA-DOAP06340 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLA-DOAP06340 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 BX842568.4-201ENST00000421222 227 ntBASIC20.8■□□□□ 0.92
HLA-DOAP06340 AC002558.1-201ENST00000488906 803 ntBASIC20.8■□□□□ 0.92
HLA-DOAP06340 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 AC004706.3-202ENST00000621574 984 ntBASIC20.8■□□□□ 0.92
HLA-DOAP06340 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLA-DOAP06340 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.8■□□□□ 0.92
HLA-DOAP06340 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.79■□□□□ 0.92
HLA-DOAP06340 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 AC009947.1-201ENST00000444350 727 ntBASIC20.79■□□□□ 0.92
HLA-DOAP06340 KRT18P3-201ENST00000451602 1288 ntBASIC20.79■□□□□ 0.92
HLA-DOAP06340 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.79■□□□□ 0.92
HLA-DOAP06340 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.79■□□□□ 0.92
HLA-DOAP06340 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLA-DOAP06340 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 MYCLP1-201ENST00000372451 1075 ntBASIC20.78■□□□□ 0.92
HLA-DOAP06340 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HLA-DOAP06340 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.78■□□□□ 0.92
HLA-DOAP06340 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
HLA-DOAP06340 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HLA-DOAP06340 ELK2BP-201ENST00000415014 1224 ntBASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms