Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CNN2P2-201ENST00000443536 909 ntBASIC23.08■■□□□ 1.29
COL5A2P05997 CNN2P3-201ENST00000450201 906 ntBASIC23.08■■□□□ 1.29
COL5A2P05997 GATB-205ENST00000508611 605 ntTSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.08■■□□□ 1.29
COL5A2P05997 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC23.08■■□□□ 1.29
COL5A2P05997 NAA60-208ENST00000570819 833 ntTSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 AL136317.3-201ENST00000618497 906 ntBASIC23.08■■□□□ 1.29
COL5A2P05997 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
COL5A2P05997 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
COL5A2P05997 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.28
COL5A2P05997 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL5A2P05997 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL5A2P05997 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.08■■□□□ 1.28
COL5A2P05997 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
COL5A2P05997 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
COL5A2P05997 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
COL5A2P05997 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC23.07■■□□□ 1.28
COL5A2P05997 AC002056.1-201ENST00000395613 760 ntBASIC23.07■■□□□ 1.28
COL5A2P05997 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
COL5A2P05997 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 AC140658.5-201ENST00000438532 169 ntBASIC23.07■■□□□ 1.28
COL5A2P05997 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC23.07■■□□□ 1.28
COL5A2P05997 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
COL5A2P05997 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC23.07■■□□□ 1.28
COL5A2P05997 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 AC012645.4-201ENST00000610691 1061 ntBASIC23.07■■□□□ 1.28
COL5A2P05997 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC23.07■■□□□ 1.28
COL5A2P05997 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
COL5A2P05997 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
COL5A2P05997 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.07■■□□□ 1.28
COL5A2P05997 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL5A2P05997 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
COL5A2P05997 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC23.06■■□□□ 1.28
COL5A2P05997 AC236430.1-201ENST00000402231 743 ntBASIC23.06■■□□□ 1.28
COL5A2P05997 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC23.06■■□□□ 1.28
COL5A2P05997 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC23.06■■□□□ 1.28
COL5A2P05997 HLA-J-202ENST00000469281 1241 ntBASIC23.06■■□□□ 1.28
COL5A2P05997 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC23.06■■□□□ 1.28
COL5A2P05997 POLD4-211ENST00000539074 714 ntTSL 3 BASIC23.06■■□□□ 1.28
COL5A2P05997 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC23.06■■□□□ 1.28
COL5A2P05997 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.06■■□□□ 1.28
COL5A2P05997 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.06■■□□□ 1.28
COL5A2P05997 AC073130.3-201ENST00000624389 2278 ntBASIC23.06■■□□□ 1.28
COL5A2P05997 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
COL5A2P05997 AC093677.2-201ENST00000600169 1863 ntBASIC23.06■■□□□ 1.28
COL5A2P05997 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
COL5A2P05997 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC23.06■■□□□ 1.28
COL5A2P05997 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
COL5A2P05997 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.06■■□□□ 1.28
COL5A2P05997 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL5A2P05997 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.05■■□□□ 1.28
COL5A2P05997 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC23.05■■□□□ 1.28
COL5A2P05997 RNA5SP421-201ENST00000516864 134 ntBASIC23.05■■□□□ 1.28
COL5A2P05997 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
COL5A2P05997 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 CROCCP3-202ENST00000420820 1947 ntBASIC23.05■■□□□ 1.28
COL5A2P05997 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC23.05■■□□□ 1.28
COL5A2P05997 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC23.05■■□□□ 1.28
COL5A2P05997 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
COL5A2P05997 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
COL5A2P05997 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL5A2P05997 HNRNPFP1-201ENST00000391730 1133 ntBASIC23.05■■□□□ 1.28
COL5A2P05997 KRT18P32-201ENST00000424695 1287 ntBASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms