Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 AC104819.1-201ENST00000504587 486 ntBASIC17.95■□□□□ 0.46
HLA-DQB2P05538 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 AC096582.2-201ENST00000510860 516 ntBASIC17.95■□□□□ 0.46
HLA-DQB2P05538 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 AC009533.2-201ENST00000543664 586 ntBASIC17.95■□□□□ 0.46
HLA-DQB2P05538 AC012615.1-201ENST00000565797 1299 ntBASIC17.95■□□□□ 0.46
HLA-DQB2P05538 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.95■□□□□ 0.46
HLA-DQB2P05538 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 FAM220CP-201ENST00000395253 831 ntBASIC17.94■□□□□ 0.46
HLA-DQB2P05538 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 AC011467.2-201ENST00000598425 242 ntBASIC17.94■□□□□ 0.46
HLA-DQB2P05538 AC019129.2-201ENST00000609837 1235 ntBASIC17.94■□□□□ 0.46
HLA-DQB2P05538 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 TP73-AS1-210ENST00000637775 1455 ntBASIC17.94■□□□□ 0.46
HLA-DQB2P05538 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.94■□□□□ 0.46
HLA-DQB2P05538 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 HCG4P8-203ENST00000443049 980 ntBASIC17.93■□□□□ 0.46
HLA-DQB2P05538 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
HLA-DQB2P05538 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 AC122714.2-201ENST00000502787 707 ntBASIC17.92■□□□□ 0.46
HLA-DQB2P05538 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HLA-DQB2P05538 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms