Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
APOBP04114 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC10.93□□□□□ -0.66
APOBP04114 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOBP04114 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.93□□□□□ -0.66
APOBP04114 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC10.93□□□□□ -0.66
APOBP04114 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOBP04114 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
APOBP04114 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.93□□□□□ -0.66
APOBP04114 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC10.93□□□□□ -0.66
APOBP04114 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
APOBP04114 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
APOBP04114 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC10.92□□□□□ -0.66
APOBP04114 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.92□□□□□ -0.66
APOBP04114 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 AC109462.3-201ENST00000573934 613 ntBASIC10.92□□□□□ -0.66
APOBP04114 TK1-204ENST00000590430 683 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 SPTSSB-204ENST00000617024 1292 ntBASIC10.92□□□□□ -0.66
APOBP04114 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC10.92□□□□□ -0.66
APOBP04114 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 SPDYE11-202ENST00000450699 704 ntBASIC10.92□□□□□ -0.66
APOBP04114 AC026150.2-201ENST00000564693 1156 ntBASIC10.92□□□□□ -0.66
APOBP04114 SPDYE9P-201ENST00000570642 692 ntBASIC10.92□□□□□ -0.66
APOBP04114 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 SPDYE10P-202ENST00000612005 668 ntBASIC10.92□□□□□ -0.66
APOBP04114 SPDYE8P-202ENST00000612377 668 ntBASIC10.92□□□□□ -0.66
APOBP04114 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 PTGES2-AS1-201ENST00000443493 2100 ntBASIC10.92□□□□□ -0.66
APOBP04114 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC10.92□□□□□ -0.66
APOBP04114 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
APOBP04114 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 AC084121.4-201ENST00000641598 221 ntBASIC10.92□□□□□ -0.66
APOBP04114 AF228730.8-201ENST00000642140 221 ntBASIC10.92□□□□□ -0.66
APOBP04114 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
APOBP04114 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.92□□□□□ -0.66
APOBP04114 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
APOBP04114 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.92□□□□□ -0.66
APOBP04114 AC026120.1-201ENST00000611536 926 ntBASIC10.92□□□□□ -0.66
APOBP04114 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
APOBP04114 AL390754.1-201ENST00000619088 582 ntBASIC10.92□□□□□ -0.66
APOBP04114 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC10.92□□□□□ -0.66
APOBP04114 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
APOBP04114 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC10.92□□□□□ -0.66
APOBP04114 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
APOBP04114 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
APOBP04114 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 AC002056.1-201ENST00000395613 760 ntBASIC10.91□□□□□ -0.66
APOBP04114 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 AL592309.1-201ENST00000443127 649 ntBASIC10.91□□□□□ -0.66
APOBP04114 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 GATD1-206ENST00000526325 756 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC10.91□□□□□ -0.66
APOBP04114 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 SPTLC1P1-201ENST00000447199 261 ntBASIC10.91□□□□□ -0.66
APOBP04114 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 AP000842.3-202ENST00000569238 1080 ntBASIC10.91□□□□□ -0.66
APOBP04114 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
APOBP04114 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC10.91□□□□□ -0.66
APOBP04114 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
APOBP04114 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC10.91□□□□□ -0.66
APOBP04114 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms