Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KRT33AO76009 AL024508.2-201ENST00000607749 1894 ntBASIC16.1■□□□□ 0.17
KRT33AO76009 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT33AO76009 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.09■□□□□ 0.17
KRT33AO76009 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT33AO76009 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 AC083849.1-201ENST00000615227 514 ntBASIC16.09■□□□□ 0.17
KRT33AO76009 HYMAI.1-201ENST00000620949 238 ntBASIC16.09■□□□□ 0.17
KRT33AO76009 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 AC138028.4-201ENST00000564984 1845 ntBASIC16.09■□□□□ 0.17
KRT33AO76009 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
KRT33AO76009 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT33AO76009 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT33AO76009 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT33AO76009 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
KRT33AO76009 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
KRT33AO76009 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT33AO76009 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT33AO76009 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
KRT33AO76009 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
KRT33AO76009 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
KRT33AO76009 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.08■□□□□ 0.17
KRT33AO76009 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
KRT33AO76009 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT33AO76009 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT33AO76009 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT33AO76009 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.08■□□□□ 0.16
KRT33AO76009 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.08■□□□□ 0.16
KRT33AO76009 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.08■□□□□ 0.16
KRT33AO76009 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.08■□□□□ 0.16
KRT33AO76009 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
KRT33AO76009 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.08■□□□□ 0.16
KRT33AO76009 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 LINC01126-201ENST00000623515 1646 ntBASIC16.08■□□□□ 0.16
KRT33AO76009 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
KRT33AO76009 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT33AO76009 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
KRT33AO76009 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.07■□□□□ 0.16
KRT33AO76009 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT33AO76009 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.07■□□□□ 0.16
KRT33AO76009 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 PCDHA12-202ENST00000613593 2588 ntBASIC16.07■□□□□ 0.16
KRT33AO76009 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
KRT33AO76009 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms