Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RFPL1O75677 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.78■□□□□ 0.44
RFPL1O75677 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.78■□□□□ 0.44
RFPL1O75677 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 PVRIG2P-201ENST00000435460 978 ntBASIC17.78■□□□□ 0.44
RFPL1O75677 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 VENTXP5-201ENST00000523979 775 ntBASIC17.78■□□□□ 0.44
RFPL1O75677 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.78■□□□□ 0.44
RFPL1O75677 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 AC116407.4-201ENST00000623319 1061 ntBASIC17.78■□□□□ 0.44
RFPL1O75677 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFPL1O75677 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.78■□□□□ 0.44
RFPL1O75677 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.78■□□□□ 0.44
RFPL1O75677 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RFPL1O75677 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.77■□□□□ 0.44
RFPL1O75677 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFPL1O75677 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RFPL1O75677 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RFPL1O75677 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 AL450487.1-201ENST00000426799 995 ntBASIC17.77■□□□□ 0.44
RFPL1O75677 DUSP5P1-201ENST00000441325 1139 ntBASIC17.77■□□□□ 0.44
RFPL1O75677 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.77■□□□□ 0.44
RFPL1O75677 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.77■□□□□ 0.44
RFPL1O75677 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.77■□□□□ 0.44
RFPL1O75677 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.77■□□□□ 0.44
RFPL1O75677 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RFPL1O75677 AC116407.2-201ENST00000613639 860 ntBASIC17.77■□□□□ 0.44
RFPL1O75677 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.77■□□□□ 0.44
RFPL1O75677 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFPL1O75677 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.77■□□□□ 0.44
RFPL1O75677 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFPL1O75677 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.77■□□□□ 0.44
RFPL1O75677 HTR7P1-202ENST00000624664 4411 ntBASIC17.77■□□□□ 0.44
RFPL1O75677 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFPL1O75677 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.43
RFPL1O75677 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFPL1O75677 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RFPL1O75677 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RFPL1O75677 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.76■□□□□ 0.43
RFPL1O75677 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 AC113404.2-201ENST00000507884 177 ntBASIC17.76■□□□□ 0.43
RFPL1O75677 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.76■□□□□ 0.43
RFPL1O75677 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.76■□□□□ 0.43
RFPL1O75677 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.76■□□□□ 0.43
RFPL1O75677 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFPL1O75677 KRT8P47-201ENST00000604727 1398 ntBASIC17.76■□□□□ 0.43
RFPL1O75677 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 TNRC18P3-201ENST00000441896 2691 ntBASIC17.75■□□□□ 0.43
RFPL1O75677 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RFPL1O75677 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.75■□□□□ 0.43
RFPL1O75677 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RFPL1O75677 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms