Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RNF13O43567 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 RNF152P1-201ENST00000397754 604 ntBASIC16.15■□□□□ 0.18
RNF13O43567 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF13O43567 AK4P3-201ENST00000418260 669 ntBASIC16.15■□□□□ 0.18
RNF13O43567 TSPY5P-201ENST00000426936 936 ntBASIC16.15■□□□□ 0.18
RNF13O43567 AC092647.4-201ENST00000457211 535 ntBASIC16.15■□□□□ 0.18
RNF13O43567 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.15■□□□□ 0.18
RNF13O43567 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RNF13O43567 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF13O43567 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF13O43567 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
RNF13O43567 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RNF13O43567 KRT89P-201ENST00000620027 1478 ntBASIC16.15■□□□□ 0.18
RNF13O43567 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.15■□□□□ 0.18
RNF13O43567 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RNF13O43567 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.14■□□□□ 0.18
RNF13O43567 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RNF13O43567 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RNF13O43567 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF13O43567 HOMER2P1-201ENST00000455653 964 ntBASIC16.14■□□□□ 0.17
RNF13O43567 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF13O43567 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF13O43567 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF13O43567 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.14■□□□□ 0.17
RNF13O43567 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 AC100803.2-201ENST00000562459 1963 ntBASIC16.14■□□□□ 0.17
RNF13O43567 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
RNF13O43567 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.14■□□□□ 0.17
RNF13O43567 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 AC022211.2-201ENST00000585075 2527 ntBASIC16.14■□□□□ 0.17
RNF13O43567 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
RNF13O43567 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RNF13O43567 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.14■□□□□ 0.17
RNF13O43567 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RNF13O43567 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RNF13O43567 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF13O43567 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RNF13O43567 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.13■□□□□ 0.17
RNF13O43567 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
RNF13O43567 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RNF13O43567 HLA-F-220ENST00000434407 884 ntBASIC16.13■□□□□ 0.17
RNF13O43567 AL359075.1-203ENST00000462729 1002 ntBASIC16.13■□□□□ 0.17
RNF13O43567 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms