Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC2O43543 AL645929.1-201ENST00000420084 975 ntBASIC15.42■□□□□ 0.06
XRCC2O43543 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.42■□□□□ 0.06
XRCC2O43543 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC2O43543 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC2O43543 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.42■□□□□ 0.06
XRCC2O43543 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 LINC01451-201ENST00000623792 534 ntBASIC15.42■□□□□ 0.06
XRCC2O43543 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC2O43543 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC2O43543 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
XRCC2O43543 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
XRCC2O43543 Z83836.1-201ENST00000624605 1642 ntBASIC15.42■□□□□ 0.06
XRCC2O43543 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.42■□□□□ 0.06
XRCC2O43543 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.42■□□□□ 0.06
XRCC2O43543 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
XRCC2O43543 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
XRCC2O43543 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.41■□□□□ 0.06
XRCC2O43543 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
XRCC2O43543 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
XRCC2O43543 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
XRCC2O43543 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
XRCC2O43543 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
XRCC2O43543 MTCL1P1-201ENST00000446207 792 ntBASIC15.41■□□□□ 0.06
XRCC2O43543 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.41■□□□□ 0.06
XRCC2O43543 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.41■□□□□ 0.06
XRCC2O43543 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 AL355312.1-201ENST00000407115 2176 ntBASIC15.41■□□□□ 0.06
XRCC2O43543 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC2O43543 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.4■□□□□ 0.06
XRCC2O43543 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
XRCC2O43543 HLA-J-201ENST00000462773 1622 ntBASIC15.4■□□□□ 0.06
XRCC2O43543 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 BX276092.7-203ENST00000637198 1536 ntBASIC15.4■□□□□ 0.06
XRCC2O43543 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 AC068472.1-201ENST00000474589 881 ntBASIC15.4■□□□□ 0.06
XRCC2O43543 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.4■□□□□ 0.06
XRCC2O43543 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.4■□□□□ 0.06
XRCC2O43543 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.4■□□□□ 0.06
XRCC2O43543 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
XRCC2O43543 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
XRCC2O43543 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.4■□□□□ 0.06
XRCC2O43543 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.4■□□□□ 0.06
XRCC2O43543 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC2O43543 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC2O43543 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
XRCC2O43543 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC2O43543 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms