Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.34■□□□□ 0.05
PHF1O43189 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PHF1O43189 REXO1L9P-201ENST00000604264 2108 ntBASIC15.34■□□□□ 0.05
PHF1O43189 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.34■□□□□ 0.05
PHF1O43189 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PHF1O43189 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PHF1O43189 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PHF1O43189 TSPY19P-201ENST00000418461 509 ntBASIC15.34■□□□□ 0.05
PHF1O43189 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 TSPY18P-201ENST00000441642 509 ntBASIC15.34■□□□□ 0.05
PHF1O43189 AP002383.4-201ENST00000442518 975 ntBASIC15.34■□□□□ 0.05
PHF1O43189 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
PHF1O43189 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.34■□□□□ 0.05
PHF1O43189 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 AL662844.1-201ENST00000546340 181 ntBASIC15.34■□□□□ 0.05
PHF1O43189 AC091304.2-201ENST00000564639 760 ntBASIC15.34■□□□□ 0.05
PHF1O43189 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PHF1O43189 AL136038.4-201ENST00000603606 1261 ntBASIC15.34■□□□□ 0.05
PHF1O43189 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 AL121772.3-201ENST00000610840 674 ntBASIC15.34■□□□□ 0.05
PHF1O43189 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PHF1O43189 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PHF1O43189 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PHF1O43189 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PHF1O43189 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PHF1O43189 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.33■□□□□ 0.05
PHF1O43189 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PHF1O43189 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PHF1O43189 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PHF1O43189 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 SLC25A6P5-201ENST00000435663 894 ntBASIC15.33■□□□□ 0.04
PHF1O43189 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.33■□□□□ 0.04
PHF1O43189 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PHF1O43189 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.33■□□□□ 0.04
PHF1O43189 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.33■□□□□ 0.04
PHF1O43189 AC120114.3-201ENST00000611923 658 ntBASIC15.33■□□□□ 0.04
PHF1O43189 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.33■□□□□ 0.04
PHF1O43189 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.33■□□□□ 0.04
PHF1O43189 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.33■□□□□ 0.04
PHF1O43189 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PHF1O43189 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PHF1O43189 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.33■□□□□ 0.04
PHF1O43189 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 AL391807.1-203ENST00000604392 2365 ntBASIC15.33■□□□□ 0.04
PHF1O43189 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PHF1O43189 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.33■□□□□ 0.04
PHF1O43189 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.33■□□□□ 0.04
PHF1O43189 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PHF1O43189 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PHF1O43189 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PHF1O43189 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.32■□□□□ 0.04
PHF1O43189 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PHF1O43189 AC106795.1-205ENST00000512851 1056 ntBASIC15.32■□□□□ 0.04
PHF1O43189 AP002469.2-201ENST00000531724 424 ntBASIC15.32■□□□□ 0.04
PHF1O43189 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.32■□□□□ 0.04
PHF1O43189 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.32■□□□□ 0.04
PHF1O43189 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.32■□□□□ 0.04
PHF1O43189 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PHF1O43189 SLC25A6P4-201ENST00000586535 553 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms