Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.29■□□□□ 0.68
PITPNM1O00562 AC025423.2-201ENST00000537570 439 ntBASIC19.29■□□□□ 0.68
PITPNM1O00562 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.29■□□□□ 0.68
PITPNM1O00562 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.29■□□□□ 0.68
PITPNM1O00562 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC19.29■□□□□ 0.68
PITPNM1O00562 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PITPNM1O00562 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PITPNM1O00562 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PITPNM1O00562 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.29■□□□□ 0.68
PITPNM1O00562 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PITPNM1O00562 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PITPNM1O00562 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.29■□□□□ 0.68
PITPNM1O00562 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
PITPNM1O00562 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PITPNM1O00562 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PITPNM1O00562 AC018445.3-201ENST00000624177 1945 ntBASIC19.28■□□□□ 0.68
PITPNM1O00562 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.28■□□□□ 0.68
PITPNM1O00562 MRPL20P1-201ENST00000400819 433 ntBASIC19.28■□□□□ 0.68
PITPNM1O00562 CEND1P1-201ENST00000451006 455 ntBASIC19.28■□□□□ 0.68
PITPNM1O00562 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC19.28■□□□□ 0.68
PITPNM1O00562 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC19.28■□□□□ 0.68
PITPNM1O00562 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.28■□□□□ 0.68
PITPNM1O00562 AC019129.2-201ENST00000609837 1235 ntBASIC19.28■□□□□ 0.68
PITPNM1O00562 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC19.28■□□□□ 0.68
PITPNM1O00562 RNF165-205ENST00000588679 2904 ntBASIC19.28■□□□□ 0.68
PITPNM1O00562 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 GPALPP1-203ENST00000379151 1393 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PITPNM1O00562 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PITPNM1O00562 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PITPNM1O00562 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PITPNM1O00562 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PITPNM1O00562 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PITPNM1O00562 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.27■□□□□ 0.68
PITPNM1O00562 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PITPNM1O00562 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.27■□□□□ 0.68
PITPNM1O00562 RWDD4P1-201ENST00000488019 565 ntBASIC19.27■□□□□ 0.68
PITPNM1O00562 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC19.27■□□□□ 0.68
PITPNM1O00562 AC092451.2-201ENST00000538746 658 ntBASIC19.27■□□□□ 0.68
PITPNM1O00562 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.27■□□□□ 0.68
PITPNM1O00562 AC096734.2-201ENST00000562054 433 ntBASIC19.27■□□□□ 0.68
PITPNM1O00562 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.27■□□□□ 0.68
PITPNM1O00562 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PITPNM1O00562 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PITPNM1O00562 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PITPNM1O00562 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.27■□□□□ 0.68
PITPNM1O00562 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.27■□□□□ 0.67
PITPNM1O00562 AL031598.1-201ENST00000561511 1773 ntBASIC19.27■□□□□ 0.67
PITPNM1O00562 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PITPNM1O00562 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PITPNM1O00562 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.26■□□□□ 0.67
PITPNM1O00562 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PITPNM1O00562 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.26■□□□□ 0.67
PITPNM1O00562 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PITPNM1O00562 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PITPNM1O00562 SSR1P1-201ENST00000407630 814 ntBASIC19.26■□□□□ 0.67
PITPNM1O00562 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC19.26■□□□□ 0.67
PITPNM1O00562 AC126763.1-201ENST00000552015 2118 ntBASIC19.26■□□□□ 0.67
PITPNM1O00562 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.26■□□□□ 0.67
PITPNM1O00562 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.26■□□□□ 0.67
PITPNM1O00562 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.26■□□□□ 0.67
PITPNM1O00562 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.26■□□□□ 0.67
PITPNM1O00562 AL357094.1-201ENST00000603845 844 ntBASIC19.26■□□□□ 0.67
PITPNM1O00562 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PITPNM1O00562 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PITPNM1O00562 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PITPNM1O00562 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms