Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AC093677.2-201ENST00000600169 1863 ntBASIC23.79■■□□□ 1.4
SBNO1A3KN83 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SBNO1A3KN83 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SBNO1A3KN83 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 FAM86GP-201ENST00000448322 971 ntBASIC23.78■■□□□ 1.4
SBNO1A3KN83 SLBP-205ENST00000488267 987 ntTSL 2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 Z92544.3-201ENST00000624747 417 ntBASIC23.78■■□□□ 1.4
SBNO1A3KN83 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SBNO1A3KN83 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SBNO1A3KN83 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SBNO1A3KN83 AC006116.8-202ENST00000587620 1550 ntBASIC23.78■■□□□ 1.4
SBNO1A3KN83 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SBNO1A3KN83 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SBNO1A3KN83 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SBNO1A3KN83 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 AC092919.2-201ENST00000623631 1645 ntBASIC23.78■■□□□ 1.4
SBNO1A3KN83 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.78■■□□□ 1.4
SBNO1A3KN83 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 DUT-210ENST00000559935 569 ntTSL 3 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
SBNO1A3KN83 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.77■■□□□ 1.4
SBNO1A3KN83 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
SBNO1A3KN83 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SBNO1A3KN83 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 AQP6-203ENST00000551733 849 ntTSL 3 BASIC23.77■■□□□ 1.4
SBNO1A3KN83 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.77■■□□□ 1.4
SBNO1A3KN83 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SBNO1A3KN83 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
SBNO1A3KN83 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.39
SBNO1A3KN83 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.77■■□□□ 1.39
SBNO1A3KN83 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.39
SBNO1A3KN83 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 AL627223.1-201ENST00000416693 442 ntBASIC23.76■■□□□ 1.39
SBNO1A3KN83 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 ACTL9-202ENST00000612068 1252 ntBASIC23.76■■□□□ 1.39
SBNO1A3KN83 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SBNO1A3KN83 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SBNO1A3KN83 WIZP1-201ENST00000531444 2299 ntBASIC23.75■■□□□ 1.39
SBNO1A3KN83 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.75■■□□□ 1.39
SBNO1A3KN83 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SBNO1A3KN83 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms