Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AL024508.2-201ENST00000607749 1894 ntBASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC018695.7-201ENST00000624587 2492 ntBASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC008894.3-201ENST00000624324 3103 ntBASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF103-CHMP3A0A140T963 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RNF103-CHMP3A0A140T963 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 LINC00602-201ENST00000629776 2065 ntBASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 MMP23A-201ENST00000234610 1017 ntBASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 AC024243.1-201ENST00000609234 778 ntBASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RNF103-CHMP3A0A140T963 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
RNF103-CHMP3A0A140T963 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF103-CHMP3A0A140T963 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms